Search Results for "affinity" - Page 2
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Showing 35 open source projects for "affinity"
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Autmated Peptide Screening
Screening peptides for MHC and/or MHC-T cell receptor affinity
Modified version of AutoGrow, autogrow.ucsd.edu/ , with a mutation script added in the class files, and a global change of the defined mutation point from Hydrogen atoms to Calphas, to allow placement of Amino Acids. Deposited are 3 versions, used for my PhD Thesis. These allow for mutation of short 2-15 amino acid peptides, and associated screening of these using AutoDock or AutoDock Vina, allowing for 8 CPU systems to screen 10K peptides a day or 1-2K with flexible residues added in. A... -
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psmem
Shows detailed information about a specific process
information about memory (VMRSS) used by a process, cpu affinity, user and group ownership of the process and process status -
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inhibitomev1
A systems-level host-factor survey of viral proteins that modulate inn
Viral gene products that modulate the cellular antiviral immune response targets of such viral proteins are often not known. We performed a functional proteomic approach to identify cellular binding partners of viral innate immune modulators. We used a Tet-on system to express such viral proteins in HEK293 cells and isolated protein complexes by tandem affinity purification. Altogether, we used 70 viral proteins (from 30 viruses) resulting in identification of 579 unique host proteins... -
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EGA
A novel and effictive GA algorithm to solve optimization problem
Classical genetic algorithm suffers heavy pressure of fitness evaluation for time-consuming optimization problems. To address this problem, we present an efficient genetic algorithm by the combination with clustering methods. The high efficiency of the proposed method results from the fitness estimation and the schema discovery of partial individuals in current population and. Specifically, the clustering method used in this paper is affinity propagation. The numerical experiments demonstrate... -
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The CUDA wrapper library provides means for an efficient resource sharing and resource protection on multi-user GPU clusters.It implements the following functionality: 1) Virtualization of the physical GPU devices 2) Ensuring NUMA affinity for GPUs
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Process Sniper is a light tool which allows to get information about a specific process by dragging the mouse on one of its windows. Process Sniper can also kill, set priority/affinity, pause/resume the process... etc.
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Systray application that manages affinity and priority settings of Windows programs based on user defined profiles. Affinity profiles may specify either physical CPUs or logical CPU identifiers that expose eventual asymmetries in the system.
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A simple editor for HTML, XML, PHP, and CSS documents which can provide a preview of your file and various other helpful features.
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AutoAffinity was written to help force certain processes to run on only a single core. It works off of a pattern, assigning all executing processes matching that naming pattern to a single execution core. It's especially useful for F@H, S@H, etc.
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Venn is a secure workspace for remote work that isolates and protects work from any personal use on the same computer. Work lives in a secure local enclave that is company controlled, where all data is encrypted and access is managed. Within the enclave – visually indicated by the Blue Border around these applications – business activity is walled off from anything that happens on the personal side. As a result, work and personal uses can now safely coexist on the same computer.
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priocntl is a command-line utility that allows a user to change the real-time scheduling parameters (e.g. priority, scheduling policy, CPU affinity) of a process.