Search Results for "affinity"
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Showing 28 open source projects for "affinity"
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Thread Affinity
Bind a java thread to a given core
Lets you bind a thread to a given core, this can improve performance (this library works best on linux). Java-Thread-Affinity will try to use JNA to provide access to native thread-handling functions. JNA should be installed on your system to get the most from this library. Java-Thread-Affinity currently depends on JNA version 4.4.0, which in turn depends on a version of GLIBC >= 2.14. If your operating system is an old one, with a version of GLIBC released before 2011, this library will not be able to invoke native functions. -
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open-affinity-patcher
Патчер Affinity
Интерактивный патчер libaffinity.dll для Windows для отключения принудительной авторизации и офлайн работы в Affinity. -
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Clustering.jl
A Julia package for data clustering
Methods for data clustering and evaluation of clustering quality. -
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Docking-Affinity-Plotter
Docking Affinity Plotter: Visualize and analyze binding affinity data.
.... ✅ Binding affinity distribution ✅ Density plot of binding affinity ✅ Box plot of binding affinity ✅ RMSD distribution (ub & lb) ✅ 3D scatter plot: Binding affinity vs RMSD ✅ Scatter plots: Affinity vs RMSD ub/lb ✅ Pairwise relationships among affinity and RMSD values ✅ Top 10 ligands by minimum binding affinity ✅ Top 3 recommended ligands ✅ Statistical analysis Citation If you use Docking Affinity Plotter in your research, please cite it as: Md. ... -
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DataFrame
C++ DataFrame for statistical, Financial, and ML analysis
...DataFrame also includes a large collection of analytical algorithms in the form of visitors. These are from basic stats such as Mean, and Std Deviation and return, … to more involved analysis such as Affinity Propagation, Polynomial Fit, and Fast Fourier transform of arbitrary length … including a good collection of trading indicators. You can also easily add your own algorithms. -
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Honggfuzz
Security oriented software fuzzer
...The tool integrates tightly with sanitizers and can attach to already running processes, making it convenient for both white-box and black-box fuzzing. When it finds a crash, honggfuzz captures detailed context, minimizes the input, and can pin reproducibility by controlling CPU affinity and resource limits. Its small footprint and straightforward CLI make it easy to drop into CI or long-running campaigns across many cores. -
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Fast-Kubernetes
This repo covers Kubernetes with LABs: Kubectl, Pod, Deployment
...The content is organized as Markdown how-tos and cheat-sheets covering core objects and workflows — Pods, Deployments, Services, ConfigMaps, Secrets, PV/PVC, StatefulSets, DaemonSets, Jobs/CronJobs, Ingress, affinity/taints, and more — plus command-line kubectl quick references. It also includes end-to-end cluster setup guides (kubeadm with containerd or Docker, Minikube examples), Helm and CI/CD notes (Helm + Jenkins lab), and monitoring guidance with Prometheus & Grafana so learners can practice real operational tasks. Labs are written as short, reproducible exercises (imperative and declarative examples) designed for people who already know containers and want concrete, runnable Kubernetes practice. -
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pv-migrate
CLI tool to easily migrate Kubernetes persistent volumes
pv-migrate is a CLI tool/kubectl plugin to easily migrate the contents of one Kubernetes PersistentVolumeClaim to another. On Kubernetes, if you need to rename a resource (like a Deployment) or to move it to a different namespace, you can simply create a copy of its manifest with the new namespace and/or name and apply it. However, it is not as simple with PersistentVolumeClaim resources: They are not only metadata, but they also store data in the underlying storage backend. In these cases,... -
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Ultra Performance Tuning
Debian-based distribution for deterministic, RT and low-latency works
...At the core of the distribution is a fully preemptive PREEMPT_RT patched kernel, ensuring strict microsecond-level scheduling determinism. By employing CPU scheduler tuning, hardware interrupt (IRQ) affinity steering, and optimized virtual memory management parameters, Ultra Performance Tuning minimizes system and input latencies. The distribution features a lightweight, custom-tailored XFCE4 desktop environment that reduces system overhead. Ultra Performance Tuning is designed specifically for environments where timing precision and operational predictability are critical, such as professional digital audio workstations (DAW/Studio), high-precision robotics, industrial automation, and real-time data streaming. ... -
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Anti-Spam SMTP Proxy Server
Anti-Spam SMTP Proxy Server implements multiple spam filters
The Anti-Spam SMTP Proxy (ASSP) Server project aims to create an open source platform-independent SMTP Proxy server which implements auto-whitelists, self learning Hidden-Markov-Model and/or Bayesian, Greylisting, DNSBL, DNSWL, URIBL, SPF, SRS, Backscatter, Virus scanning, attachment blocking, Senderbase and multiple other filter methods. Click 'Files' to download the professional version 2.8.1 build 24261. A linux(ubuntu 20.04 LTS) and a freeBSD 12.2 based ready to run OVA of ASSP V2 are... -
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Java Multiprocessing
Java explicit multiprocessing, SSI and cluster management tool
...JMP allows running a piece of Java code on a separate process either locally or on remote machine. ▪ If the code in question is not present on the target machine, it can be dynamically uploaded. ▪ JMP allows setting affinity for a new process explicitly instead of relying on the OS. ▪ JMP also contains a simple cluster management / load balancing tool called JMP node. ▪ JMP = SSI + load balancing + multiprocessing API ▪ JMP is available on ENGITEX Java cloud as well as for local deployment. Two of the most obvious JMP use cases are: a. All kinds of data parallelism (exhaustive search algorithms, optimization problems). ... -
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QuadRay-engine
Realtime raytracer using SIMD on ARM, MIPS, PPC and x86
QuadRay engine is a realtime raytracing project aimed at full SIMD utilization on ARM, MIPS, POWER and x86 architectures. The efficient use of SIMD is achieved by processing four rays at a time to match SIMD register width (hence the name). The rendering core of the engine is written in a unified SIMD assembler allowing single assembler code to be compatible with different processor architectures, thus reducing the need to maintain multiple parallel versions. At present, Intel... -
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KeySender
Send key sequences including modifiers to windowed PC applications
...Each button is defined with a description and the sequence, keyboard modifiers that are accepted are: Ctrl Alt Shift Up Down Left Right See screenshot 1 for the configuration file (.txt) parameter descriptions. If target window name (partial match enabled) is not detected, all buttons are disabled and "greyed out" Example files in the .zip are configured for the Affinity Photo and Notepad apps, Clicking on the last dark blue displays a configuration menu to set its parameters. The full file selected in the list can be edited by clicking the "CONFIGURATION FILE" text. -
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AFP_FullScreenPreview
Add preview in fullscreen mode for Affinity Photo
AFP_FullScreenPreview - add preview in full screen mode for Affinity Photo A great image editor, Affinity Photo currently lacks a few features – one of which is the ability to see your work-in-progress with a single hotkey. AFP_FullScreenPreview was written to fix that. It works using the scripting utility AutoHotkey, the Windows Clipboard, and the image viewer IrfanView. Click on 'Files' above to view the Readme. -
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logging-operator
A golang based operator to create and manage EFK .
Logging Operator is an operator created in Golang to set up and manage EFK(Elasticsearch, Fluentd, and Kibana) cluster inside Kubernetes and Openshift environment. This operator is capable of setting up each individual component of EFK cluster separately. -
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edgemealsoftware
PriFinitty / Set Affinity
https://edgemealsoftware.sourceforge.io/ Freeware for Windows XP CPU Affinity Programs - Set CPU Affinity and Priority of files manually or automatically. (Multi-Core CPUs) CPU Usage in Tray - Display CPU usage in system tray for single and multi-core CPUs. AMD64 Calculator v1.0.08 (65 KB - Jan 10th, 2007) Screen Shot Calculator to figure CPU, HT and Ram speeds on AMD socket 939 system. =============== Terms of Agreement: =============== By using our freeware, you agree to the following terms... 1) You may use the software freely and with no charge. 2) You MAY NOT redistribute this software (for example to a web site) without written permission from the author. ... -
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Spotify Web API JS
A client-side JS wrapper for the Spotify Web API
This is a lightweight wrapper for the Spotify Web API (2.6kB gzipped + compressed). It includes helper functions for all Spotify's endpoints, such as fetching metadata (search and look-up of albums, artists, tracks, playlists, new releases, podcasts) and user's information (follow users, artists and playlists, and saved tracks management). It doesn't have any dependencies and supports callbacks and promises. It is intended to be run on a browser, but if you want to use Node.JS to make the... -
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Mowglee
Mowglee - The Geo Crawler!
Mowglee is a distributed, multi-threaded, asynchronous task execution based web crawler in Java.It is designed for geographic affinity and is highly modular. -
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NiceHash Miner
NiceHash easy to use CPU & GPU miner
NiceHash Miner is an easy to use CPU & GPU cryptocurrency miner for Windows. With a simple an intuitive graphical user interface it allows you to quickly turn your PC, workstation or server into money-making cryptocurrency mining machine. Why leave your computer idle, whereas it could earn you Bitcoins with just a few clicks? NiceHash Miner is essentially the only tool a miner needs. No need to go through tons of configuration files, various mining software versions, configuration tuning... -
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AutoGrow
AutoGrow 3.1 is an evolutionary algorithm that optimizes candidate lig
IMPORTANT NOTE: The latest version of AutoGrow (v4) can be found at http://git.durrantlab.com/jdurrant/autogrow4 More information about the older version posted here on SourceForge can be found at http://autogrow.ucsd.edu AutoGrow 3.1 is an evolutionary algorithm that optimizes candidate ligands for predicted binding affinity and other druglike properties. Though no substitute for the medicinal chemist, AutoGrow attempts to introduce some chemical intuition into the automated optimization process. By carefully crafting chemically feasible druglike molecules, we hope that AutoGrow 3.1 will help supplement the chemist's efforts. -
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BRACIL-IA
Inference of Genome Accessibility in Bacteria from ChIP-seq data.
...This code uses ChIP-seq from multiple experiments to infer the hidden variable for genome accessibility. This is performed by a linear mixed effect model that considers two parameters: DNA affinity and DNA accessibility. The fundaments for this code and its biological relevance is described in the following reference: Gomes ALC, Wang HH (2016) The Role of Genome Accessibility in Transcription Factor Binding in Bacteria. PLoS Comput Biol 12(4): e1004891. doi:10.1371/journal.pcbi.1004891 -
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SPR MCMC
A windows executable for running the Bayesian inference on SPR data.
A windows executable (C# application) to run the Bayesian inference to estimate the affinity kinetics as well as the active concentration on the SPR (surface plasmon resonance) data. -
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apmsWAPP
Pre- and Postprocessing For Affinity Purification Mass Spectrometry
The reliable detection of protein-protein-interactions by affinity purification mass spectrometry (AP-MS) is a crucial stepping stone for the understanding of biological processes. The main challenge in a typical AP-MS experiment is to separate true interaction proteins from contaminants by contrasting counts of proteins binding to specific baits with counts of negative controls. -
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inhibitomev1
A systems-level host-factor survey of viral proteins that modulate inn
...We performed a functional proteomic approach to identify cellular binding partners of viral innate immune modulators. We used a Tet-on system to express such viral proteins in HEK293 cells and isolated protein complexes by tandem affinity purification. Altogether, we used 70 viral proteins (from 30 viruses) resulting in identification of 579 unique host proteins. These protein complexes were analysed by mass spectrometry (MS) and integrated into a protein interaction map for deep bioinformatic and network analysis. Selected number of candidates were further functionally validated. -
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Process Sniper is a light tool which allows to get information about a specific process by dragging the mouse on one of its windows. Process Sniper can also kill, set priority/affinity, pause/resume the process... etc.
