Search Results for "mapping data" - Page 14
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Showing 1057 open source projects for "mapping data"
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JAS-mine
Toolkit for agent-based & dynamic microsimulation modelling
JAS-mine is a Java platform that aims at providing a unique simulation tool for discrete-event simulations, including agent-based and microsimulation models. With the aim to develop large-scale, data-driven models, the main architectural choice of JAS-mine is to use whenever possible standard, open-source tools already available in the software development community. It has built-in utilities for communicating with an underlying relational database. In addition, the platform provides... -
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LaueTools
open source python packages for X-ray MicroLaue Diffraction analysis
LaueTools is an open-source project for white beam Laue x-ray microdiffraction data analysis including tools in image processing, peaks searching & indexing, crystal structure solving (orientation & strain) and data & grain mapping visualisation. Python 3 Code and new features are now at: https://gitlab.esrf.fr/micha/lauetools -
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Django REST Pandas
Serves up Pandas dataframes via the Django REST Framework
Django REST Pandas (DRP) provides a simple way to generate and serve pandas DataFrames via the Django REST Framework. The resulting API can serve up CSV (and a number of other formats for consumption by a client-side visualization tool like d3.js. The design philosophy of DRP enforces a strict separation between data and presentation. This keeps the implementation simple, but also has the nice side effect of making it trivial to provide the source data for your visualizations. This... -
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easy-dhpsf
GUI for fitting 3D single-molecule images using the double-helix PSF
This package of MATLAB routines with accompanying GUI allows scientific users to measure the 3D location of single molecules when using the double-helix point spread function (DH-PSF) widefield microscope. Version 2 also includes code that facilitates combining localization data from two spectral channels using a locally-weighted quadratic 3D registration function Features - Double-Gaussian estimator is calibrated via an axial scan of bright immobile fluorescent emitters (e.g. beads) - DH localization is performed through template matching and subsequent double Gaussian fitting - Tiff stacks of SM images are analyzed using template matching followed by double-Gaussian fitting to extract estimates of the molecule positions - Two spectral channels are registered by generating a locally-weighted quadratic mapping function from control point pairs -
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The purpose of GeoRaptor project is to extend Oracle SQL Developer with additional functionality for database administrators or developers working with Oracle Spatial data. Dear Users, A port to version 4.x of SQL Developer is being attempted. It is not simple due to the lack of development resources. Please keep using GeoRaptor with SQL Developer 3.x until the new version is available. Thanks. Simon Greener
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TaBS-Pipe
Targeted Bisulfite Sequencing Data Analysis Pipeline v1.0.2
A pipeline to analyze the data obtained from targeted bisulfite sequencing through the ion-torrent platform. TaBSAP is a pipeline to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step and enables a researcher to analyze the methylation levels of their samples straight away. It's main features are: -Bisulfite mapping and methylation calling in one single step -Supports single-end read alignments -Alignment seed length, number of mismatches etc. are adjustable -The output gives heatmap with categories. -
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The Embassy Of Good Science
Mapping Ethics and Integrity of Research
The areas of Research Ethics and Research Integrity (RE+RI) are rapidly evolving. New technologies, complex statistical methods, pressure to publish and obtain grants, and growing emphasis on stakeholder driven science increase the complexity of conducting science. In this complex and dynamic environment, it is not easy to identify the correct rules and best tools for responsible conduct of research. We at the EnTIRE project aim to create an online platform that makes RE+RI information ... -
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MaRC (Map Reprojections and Conversions) is a C++ library and program designed to produce map projections of bodies thay may be represented as oblate spheroids from digital images (e.g. FITS images) or computed values (e.g. incidence and emission angles).
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HSRA
Hadoop spliced read aligner for RNA-seq data
HSRA is a MapReduce-based parallel tool for mapping reads from RNA sequencing (RNA-seq) experiments. RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. ... -
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A key goal for NEMO is the development of a formal logic (“ontology”) to support data sharing, logic-based queries and mapping/integration of patterns across data from different labs, different experiment paradigms, and different modalities (EEG/MEG)
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MIRA V5 is available only on GitHub! The V4 version released here on SourceForge stay up as some automated release fetching packages rely on V4. MIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable, uncorrected not yet.
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KittyORM
KittyORM is an ORM library designed for use with Android and SQLite.
KittyORM is an Object-Relational Mapping library designed for use with Android and SQLite. It implements Data Mapper pattern design and its main purpose is to simplify interaction with SQLite database in Android applications. Written in Java 7 it supports devices from API level 9 Android. Main features we want to achieve with KittyORM are: * simple and clear API; * high flexibility of working with model POJO files via database mappers that grants you an ability to focus on your business processes not on working with raw SQL queries; * full support of all features to create your SQLite schema via built-in annotations; * flexible way to manage all things you may want to change or implement; KittyORM project contains ORM library itself, demo and tutorial application available at Play Market and documentation located at https://akaish.github.io/KittyORMPages/ Current version: [0.1.2] -
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Ardent
Self-validating, secure and smart models for Laravel's Eloquent ORM
Self-validating, secure and smart models for Laravel's Eloquent ORM. Based on the Aware bundle for Laravel 3 by Colby Rabideau. Add laravelbook/ardent as a requirement to composer.json. You can also add the package using composer require laravelbook/ardent and later specifying the version you want (for now, dev-master is your best bet). The magic-dust-powered, wrist-friendly, one-stop solution to all your dreary input sanitization boilerplates! Puns aside, input validation functionality can... -
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Joiner (oracle, excel, dbf export)
Convert and merge Oracle, Excel, Dbf, and Text data (for Windows)
Uses Oracle, Excel, Dbf and Text data (.txt files) as data sources. It can unite several sources into one, while changing the format of the result to any one presented. Supports the command line and LOG files. To work, you must create a job configuration and save it as XML file (examples are attached). Help is available with the -h option in command line. -
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libosmscout
Library for OpenStreetMap offline rendering and routing
libosmscout offers applications simple, high-level interfaces to offline rendering and routing functionalities based on OpenStreetMap data. It does so by preprocessing *.osm data files and generating binary data and index files for fast access. -
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A genome wide mapping data interpretation platform for NGS(ChIPSeq). A tutorial can be found at: http://genomeast.igbmc.fr/wiki/doku.php?id=training:seqminer
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HandyJSON
A handy swift json-object serialization/deserialization library
HandyJSON is a framework written in Swift which makes converting model objects( pure classes/structs ) to and from JSON easy on iOS. Compared with others, the most significant feature of HandyJSON is that it does not require the objects inherit from NSObject(not using KVC but reflection), nor implements a 'mapping' function(writing value to memory directly to achieve property assignment). HandyJSON is totally dependent on the memory layout rules inferred from Swift runtime code. We are... -
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BEAST
BEAST is a tool dedicated to assess political goals of woody bioenergy
The BioEnergy Allocation and Simulation Tool (BEAST) is a tool dedicated to assess political goals of woody bioenergy production in the context of available biomass potentials and corresponding economic and ecological criteria on a regional level. It is a useful tool in participative decision making processes by iterative simulation and visualization of complex issues. BEAST is a data- and model-driven Decision Support System (DSS) evaluating woody biomass potentials from forests, hedges... -
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Mapbox Maps SDK for React Native
A Mapbox GL react native module for creating custom maps
...Use this same short code with all of our interactive mapping libraries, Python and JavaScript SDKs, and directly against our REST APIs. You can create and manage your access tokens on your Mapbox Account page. -
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go-kallax
Kallax is a PostgreSQL typesafe ORM for the Go language
go-kallax is a type-safe ORM for Go, designed to work seamlessly with PostgreSQL. It generates Go code from your database schema using model definitions, allowing for clean and performant data access without raw SQL. The library is built with Go idioms in mind and focuses on compile-time safety and ease of use. -
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Kundera
A JPA 2.1 compliant Polyglot Object-Datastore Mapping Library
Kundera is an object-database mapping library (ODM) for NoSQL databases, allowing Java applications to interact with various NoSQL data stores using JPA (Java Persistence API). -
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gvSIG CE (Community Edition)
The full-featured, easy-to-use desktop GIS with real processing power!
The Community Edition (gvSIG CE) is a fork of the gvSIG desktop GIS project (http://www.gvsig.org). It is open to external contributors and fully community-driven. Our official releases are designed to be portable and include all necessary binaries for Linux, Mac OS X and Windows. No installation necessary: Just download, unpack and run! -
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Vaex
Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python
...Visualization is done using histograms, density plots and 3d volume rendering, allowing interactive exploration of big data. Vaex uses memory mapping, zero memory copy policy and lazy computations for best performance (no memory wasted). Cut development cut development time by 80%. Your prototype is your solution. Create automatic pipelines for any model. -
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DL Book Notation
LaTeX files for the Deep Learning book notation
This repository collects and standardizes mathematical notation, typographic conventions, and symbol definitions used in the Deep Learning Book (by Goodfellow, Bengio & Courville). Its main goal is to provide a canonical reference for notation so that derivative works (papers, lectures, tutorials) can align notation consistently. The content includes LaTeX macros, notation tables (e.g. symbols for vectors, tensors, functions, loss, activation), and cross-references mapping symbols to their... -
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Mapyrus is software to plot Geographic Information System data to PostScript, PDF, SVG and web image files. Mapyrus combines a BASIC-like scripting language, reading GIS datasets and running as either a utility program, a Java Servlet, or as a webser
