Search Results for "coverage" - Page 13

The RDXplorer is a computational tool for copy number variants (CNV) detection in whole human genome sequence data using read depth (RD) coverage. CNV detection is based on the Event-Wise Testing (EWT) algorithm recently published by our group.

A bioinformatics tool to identify and remove rRNA sequences from metagenomic and metatranscriptomic datasets. The rRNA-like sequences are classified by domain, subunit. and bacterial phyla. Coverage plots for the top hits are provided as well.

A function memoization library for C, meant to make caching the values of functions relatively straightforward and simple. Allows memoization of functions to different contexts, so that sets of memoization caches can be cleared separately. Currently, this has only been tested with the GNU C compiler and has limited test coverage, so it is considered as Beta. If anyone wishes to contribute bugfixes, cross-compiler portability extensions, or other enhacements please feel free to contact...

BpMatch is an algorithm that, given 2 strings S and T, compute the maximum coverage of T using only subequence or reversed complemented subsequences of S, of minimum length l.

SolSNP is a Java-based DNA variant calling tool for Next-Generation Sequencing alignment data. SolSNP uses a modified Kolmogorov-Smirnov statistic and data filtering to confidently and quickly call variants on high-coverage aligned genomes.

RepMiner takes a graph theory approach to the classification and assembly of the repetitive fraction of genomic sequence data. Sequence lengths analyzed by RepMiner can range from full length transposable elements to low coverage sample sequence data.

The Coverage Simulator transforms test models. The satisfaction of a weaker coverage criterion on the target model corresponds to the satisfaction of a stronger coverage criterion on the source model. Thus, it supports many model-based test generators.

Hammerhead is a web site coverage, HTTP load generator, HTTP benchmarking, and stress testing tool. It has been designed to emulate multiple users from multiple IP addresses at maximum speed (unlike it's interpreted counterparts).

Our goal is to allow files transfer via Bluetooth from a mobile source to a mobile destination, localized outside the source's coverage area, using intermediates nodes acting like bridges.

Justus is a tool set for Progress 4GL (ABL) Developers. It includes a simplified parser for 4GL, an API to load Profiler data and a Test Coverage Tool.

The Automatic JUnit Creation Tool analyzes java classes to map all possible test branches. The tool then guides users through the generation of a JUnit test.

A user interface to launch unit test in python - compatible with unittest. Displays the test progress in a tree, can manage several test suites. Detects file editions and automatic reload of changed modules.

A low-cost, DDS-less "Software Defined Radio" full coverage receiver for all HF bands, used with powerful software on the PC for multi-mode operation The PMSDR is a small, low-cost, HF bands full coverage "Software Defined Radio" receiver.

uStomp - minimalistic stomp library written in C, with only external dependency being pthreads.

Code Coverage Tool For Oracle PL/SQL

pyneo-zadosk is a simple but highly configurable on-screen-keyboard. it uses libfakekey. it's written in python and is usable as stand-alone program or as module imported in a python app. it's output is based on GTK (currently python-gtk2 but will soon migrated to use gir).

Covered is a Verilog code coverage utility using VCD/LXT/FST dumpfiles (or VPI interface) and the design to generate line, toggle, memory, combinational logic, FSM state/arc and assertion coverage report metrics viewable via GUI or ASCII format. This project is ported to github and can be found at: https://github.com/chiphackers/covered

LOCAS is a software to assemble short reads of next generation sequencing technologies at low coverage. Its extension, SUPERLOCAS, provides some additional features for resequencing projects.

Small and very fast utility to calculate X-coverage from Next-Generation-Sequencing data.

a monospaced font covering Inscriptional Pahlavi and Inscriptional Parthian

A cross platform Http web server developed using C++. Agile methodology with emphasis on :- 1. Good Design 2. Object Oriented Programming 3. Refactoring 4. Static/Dynamic Analysis, Unit-testing, Code Coverage 5. Software Engineering best practices.

A web-based courseware system for programming courses. Provides support for on-line submission testing, static analysis, code coverage, peer and instructional code reviews and grading. Works with projects in any programming language.

VPR is a polygon rasterizer that computes exact coverage values in floating point precision. The rendering quality is on par with other high quality rasterizers, such as AGG, LibArt and FreeType. VPR includes a renderer for the Graphics32 library

Software with a graphical interface to calculate the coverage area of wireless networks in a indoor environment based on a group of pre-determined models of spreading (One Scope, Montley Keenan), this environment will be drawn by the user.

Cobertura for J2ME is a test coverage analysis tool for the J2ME platform (CLDC1.1/MIDP2.0)