Search Results for "python data analysis" - Page 122
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Showing 6383 open source projects for "python data analysis"
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eSBMTools
python tools for enhanced native structure-based modeling
eSBMTools: python tools that assist the setup and evaluation of native structure-based simulations of proteins and nucleic acids, both at the Cα and all-atom level. The tools interface with GROMACS and support its standard output formats. Information from other sources like bioinformatics or experimental data can be added to the standard native structure-based model (SBM). Publication to be cited: Benjamin Lutz, Claude Sinner, Geertje Heuermann, Abhinav Verma, and Alexander Schug. eSBMTools... -
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LDhat
Estimate Recombination Rates from Population Genetic Data
LDhat is a package written in the C language for the analysis of recombination rates from population genetic data. This package has migrated to github: https://github.com/auton1/LDhat -
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IL Music Library Deduplicator
Easily find and remove duplicates from a music collection
... duplicates or not to be scanned next time. First scan may take a while depending on your PC and number of audio files, but on subsequent scans only newly added files will be scanned. IL Music Library Deduplicator is portable and doesn't require instalation and also is free. It is written in Python and is using Chromaprint fpcalc for audio fingerprinting. It can find duplicates even if audio files have no metadata or have a different filename. -
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... and utilities, to facilitate user created content. The tools will allow users to: - View/Edit/Visualise the data of a NIF model. - Libraries to Read/Write the NIF Format. - Import/Export NIF models into various 3D package via Plug-ins. - Custom content creation for NetImmerse/Gamebryo Games.
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IBEX_MDA
An open infrastructure software to facilitate radiomics research.
..., and consistent data sharing among multiple institutions. IBEX software package was developed using the MATLAB and C/C++ programming languages. The software architecture deploys the modern model-view-controller, unit testing, and function handle programming concepts to isolate each quantitative imaging analysis task, to validate if their relevant data and algorithms are fit for use, and to plug in new modules. -
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Copy Number Explorer
Interactive Copy Number Analysis for Cancer Genomics
Deployed online at: https://arraycgh.shinyapps.io/Copy_Number_Explorer/ https://arraycgh.shinyapps.io/Copy_Number_Explorer_Survival/ Copy Number Explorer is a data mining tool for cancer researchers interested in the structural and copy number changes. Huge volumes of genomics data from nearly every cancer type are now freely available and several online databases have begun to collate and store this information. However, current tools focus on individual gene queries rather than... -
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power-console-admin
Unix/Linux console admin for PowerDNS server
Easy to use PowerDNS admin for Unix/Linux console. Work with SQLite3, MySQL, PostgreSQL backend. Easy way to create domain, add/update record data - simultaneously forward and reverse zone. Both IPv4 and IPv6 addresses. In the future maybe with ncurces UI. -
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CoGA
R package for differential co-expression analysis
CoGA (Co-expression Graph Analyzer) is an R package to identify differentially co-expressed gene sets between two phenotypes. The software infers gene regulatory networks from gene expression data, and compares structural properties of the inferred networks based on their spectrum distributions. It also compares the networks in terms of their gene centralities, clustering coefficients and shortest path lengths. In addition to the differential co-expression analyses, the tool provides graphical... -
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xml2mif
Tool for import Rosreestr XML files
Средство обработки файлов XML Росреестра (кадастровый план территории, кадастровая выписка об объекте недвижимости). По результатам обработки формируется пакет файлов mid/mif для последующего импорта в GIS MapInfo. Поддерживается одновременная обработка большого количества файлов XML. Для работы требует установки в системе интерпретатора Python 2.7 (можно взять отсюда: https://www.python.org/ftp/python/2.7.9/python-2.7.9.msi https://www.python.org/ftp/python/2.7.9/python-2.7.9.amd64.msi... -
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VADER
Lexicon and rule-based sentiment analysis tool
VADER (Valence Aware Dictionary and sEntiment Reasoner) is a lexicon and rule-based sentiment analysis tool designed for analyzing the sentiment of text, particularly in social media and short text formats. It is optimized for quick and accurate analysis of positive, negative, and neutral sentiments. -
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Cookie Cruncher For Chrome
Cookie Cruncher is an easy way to remove all cookies in Chrome.
Cookie Cruncher For Chrome is a simple, quick and effective way to safely delete all cookies in Chrome with a single click. Here is our VirusTotal link: https://www.virustotal.com/en/file/01266a35134fa5f4b687cfb91b6e84967f659a23b8435e60bef8bbe114e8fd1b/analysis/1438536098/ Note: Jiangmin and Zillya both flag the software as malicious, but this is a false positive and is to be expected, only 2 out of 55 antiviruses flag the software as "malicious". We think this is because our software... -
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This is a sophisticated & integrated simulation and analysis environment for dynamical systems models of physical systems (ODEs, DAEs, maps, and hybrid systems). It supports symbolic math, optimization, continuation, data analysis, biological apps...
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SWAT
Security Workflow Analysis Tool
The Security Workflow Analysis Tool (SWAT) is a platform for modelling and analyzing workflows. It comes with ananlysis approaches to search for data leaks in workflows. -
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A toolkit in C++ and python to process both experimental and simulation data of colloidal particles. Includes among others * a multiscale particle tracking algorithm [1] whose C++ implementation is optimised for 3D confocal data. Python implementation is more versatile (2D and 3D data). * a Leica file reader, * Steindhard bond orientational order calculation * a VTK file writer 1. Leocmach, M. & Tanaka, H. A novel particle tracking method with individual particle size measurement...
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ESBTL (Easy Structural Biology Template Library) is a lightweight C++ library that allows the handling of PDB data and provides a data structure suitable for geometric analysis and advanced constructions.
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Astrophotography Lab
A collection of useful tools for astrophotographers
Astrophotography Lab (APLab) is a free program intended for anyone interested in astrophotography. It has two main purposes: - Interpreting data extracted from your astrophotos to produce useful information. - Using this information as a help for further improving your imaging results. The program consists of four main tools: an analyser tool, a calculator tool, a simulator tool and a plotting tool. The tools are connected, allowing you to transfer information between them, and easily go... -
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This project provides a Fortran90 library and a python module for singular spectrum analyses such as PCA/EOF or MSSA. It is intended for people interested, for example, in analysing climate or financial variability.
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PetaVision
Accelerated Open-Source Neuromorphic Computing
///////// NOTICE We have migrated to GitHub: https://petavision.github.io To clone an updated repository of the PetaVision codebase, please go to our page on GitHub. ///////// PetaVision is an open source, object oriented neural simulation toolbox optimized for high-performance multi-core, multi-node computer architectures. PetaVision is intended for computational neuroscientists who seek to apply neuromorphic models to hard signal processing problems; both to improve on the... -
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Jack the Stripper
Perform automated MITM (Man In The Middle) attacks.
ENGLISH: Jack the Stripper uses iptables, Ettercap and SSLStrip to intercept data between two connected targets (IP addresses). The victims's ARP tables must be poisoned by Ettercap, that means Jack the Stripper works only on local networks. PORTUGUÊS: Jack The Stripper utiliza iptables, Ettercap e SSLStrip para interceptar dados entre dois alvos (endereços IP) interconectados. As tabelas ARP das vítimas devem ser envenenadas pelo Ettercap, isso significa que Jack The Stripper funciona... -
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iSBatch
Hyearchical Data Processing Plugin for ImageJ
iSBatch is a Java-based plugin for ImageJ (version 1.49d) or its distribution Fiji. iSBatch is designed for quick evaluation of analysis pipelines and visual exploration of datasets. It is distributed under an open open-source license (GNU General Public License, version 3). The plugin handles the data in a hierarchical fashion based on a source folder containing all data and little guidance provided by the user. The software is designed for rapid exploration of large datasets... -
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PyTRiP
Python bindings and GUI for TRiP98
A python class and GUI for visualization of data generated by the medical treatment planning software TRiP. Project has been moved to http://github.com/pytrip/pytrip on 15.06.2016 -
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A More Accurate Fourier Transform
Computes Accurate Fourier Transform via Explicit Integration not FFT
Fourier transform methods are used to analyze functions and data sets to provide frequencies, amplitudes, and phases of underlying oscillatory components. Fast Fourier transform (FFT) methods offer speed advantages over evaluation of explicit integrals (EI) that define Fourier transforms. It has been shown recently that EI methods can be more accurate than FFT methods (Courtney and Courtney, A More Accurate Fourier Transform) for scientific data analysis and that EI methods can be implemented... -
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RPy is a very simple, yet robust, Python interface to the R Programming Language. It can manage all kinds of R objects and can execute arbitrary R functions (including the graphic functions).
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NetView P
Population Genomics Network Analysis Pipeline
NetView P has been re-structured as a package for R and moved to GitHub: https://github.com/esteinig/netview -
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SEPIA: Security-oriented PN Framework
Petri net framework for security related modeling and reasoning.
SEPIA provides implementations for various types of Petri nets. Along Place/Transition-nets, it supports Petri nets with distinguishable token colors and defines coloured workflow nets, where coloured tokens are interpreted as data elements used during process execution. To support information flow analysis of processes, SEPIA defines so-called IF-Nets, tailored for security-oriented workflow modeling which enable users to assign security-levels (HIGH, LOW) to transitions, data elements...
