Search Results for "k-meleon" - Page 10
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Showing 697 open source projects for "k-meleon"
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Common Core Interactive Assessment Grid
An interactive assessment grid for the Common Core State Standards
The Common Core Interactive Assessment Grid is now available for ALL Common Core standards! This is an interactive assessment grid in the form of an Excel spreadsheet with all Common Core State Standards for English Language Arts & Literacy in History/Social Studies, Science, and Technical Subjects as well as Mathematics! You can use it to mark your students and investigate the entire Common Core State Standards. The assessment grid has been made to be easy to use and navigate. Using... -
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TAG
A tool for metatranscriptome assembly using metagenome graph
TAG is a tool for metatranscriptome assembly using de Bruijn graph of matched metagenome as the reference. TAG is an application of a reads mapping algorithm that we developed for mapping of short reads onto a de Bruijn graph of assemblies. A hash table of junction k-mers (k-mers spanning branching structures in the de Bruijn graph) is used to facilitate fast mapping of reads to the graph. We have shown that TAG helps to assemble substantially more transcripts from metatranscriptomic... -
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MinGW-w64 Arch Linux
MinGW-w64 Repository for Arch Linux
This is an unofficial Arch Linux MinGW-w64 repository. It is based on the mingw-w64 packages in the AUR https://aur.archlinux.org/packages/?K=mingw-w64. To use this repo add the following lines to /etc/pacman.conf [mingw-w64] SigLevel = Optional TrustAll Server = http://downloads.sourceforge.net/project/mingw-w64-archlinux/$arch -
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LaNet-vi provides images of large scale networks on a two-dimensional layout. The algorithm is based on the k-core and k-dense (m-core) decomposition. For more details see http://lanet-vi.fi.uba.ar.
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RAMBO-K
Read Assignment Method Based On K-mers
RAMBO-K is a tool for rapid and sensitive removal of background sequences from Next Generation Sequencing data. Please cite our publication (http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0137896) if you use RAMBO-K. We moved to GitLab, please visit our homepage for latest development. The latest stable versions of RAMBO-K will still be provided here. -
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Pentax-K-S2-WiFiRemote
Remote control for Pentax K-S2 via WiFi
Remote control for Pentax K-S2 via WiFi -
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Scaffold_Builder
Combining de novo and reference-guided assembly with Scaffold_builder
Scaffold_builder is software to order contigs generated by draft sequencing along a reference sequence. Gaps are filled with N's and small overlaps are aligned with Needleman–Wunsch algorithm and the consensus created with IUPAC codes. Scaffold_builder can help in the assembly and annotation of genomes by revealing what is missing and allowing targeted sequencing to close those gaps. (c) Silva GG, Dutilh BE, Matthews TD, Elkins K, Schmieder R, Dinsdale EA, Edwards RA. Please... -
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The"Amip" GUI is intended to provide code examples of the methods proposed in: "Unsupervised image segmentation for microarray spots with irregular contours and inner holes" authors: Bogdan Belean, Monica Borda, Jörg Ackermann, Ina Koch and Ovidiu Balacescu Journal: BMC Bioinformatics, 2015, 16:412 https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0842-3 PDE were used for grid alignment, whereas autocorrelation driven PDE and k-means clustering were used...
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V.I.K.I.
Virtual Intelligent Kyriolexy Interface
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koel
A personal music streaming server that works
Koel (also styled as koel, with a lowercase k) is a simple web-based personal audio streaming service written in Vue at the client side and Laravel on server side. Targeting web developers, Koel embraces some of the more modern web technologies – flexbox, audio and drag-and-drop API to name a few – to do its job. -
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Red-RF
Reduced Random Forest for big data
Red(uced)-RF, a new type of Random Forests that adopts dynamic data reduction and weighted upvoting techniques. Red-RF is favorably applicable to big data: it demonstrates an accurate and efficient performance while achieving a considerable data reduction w.r.t. dataset size. Manuscripts available on IEEE Xplore: H. Mohsen, H. Kurban, K. Zimmer, M. Jenne and M. Dalkilic. Red-RF: Reduced Random Forests using priority voting & dynamic data reduction. In IEEE BigData Congress'2015. H... -
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Joint Strike Force
A prototype flight simulator with several dog-fighting scenarios.
...: pitch up/down [ ]: yaw left,right j,k: yaw left,right + level out left click: shoots gun b: bomb m: missile +: increase throttle -: decrease throttle F1-F4: toggle individual panels F12: turn off panels + cockpit overlay Space: toggle forward/aft views Enter: take screenshot -
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This site contains four packages of Mass and mass-based density estimation. 1. The first package is about the basic mass estimation (including one-dimensional mass estimation and Half-Space Tree based multi-dimensional mass estimation). This packages contains the necessary codes to run on MATLAB. 2. The second package includes source and object files of DEMass-DBSCAN to be used with the WEKA system. 3. The third package DEMassBayes includes the source and object files of a Bayesian...
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ChIP-RNA-seqPRO
ChIP-RNA-sequencing-processing (ChIP-RNA-seqPRO)
ChIP-RNA-seqPRO: A strategy for identifying regions of epigenetic deregulation associated with aberrant transcript splicing and RNA-editing sites. Runnable python scripts packaged together with customized annotation libraries, demo data input and README guide. 9/26 : v1.1 Updated MAIN_IV to debug error thrown by python pandas no longer supporting 'subset'. This code will no longer be actively maintained/updated here. A cloud-based resource for comparative analysis of epigenetic,... -
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MP3Player
MP3Player for windows using Qt 5.4
... problems with Qt 5.4 and that was my problem. https://bugreports.qt.io/browse/QTBUG-42286 In case you try to run this software and some files don't play, please, try to install the K-Lite Codec Pack 1100 Basic http://downloads.ddigest.com/software/download.php?sid=1089&ssid=0&did=374 --------------------------------------------------------------------------- -
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COPEread
Connecting Overlapped Pair-End Reads
COPE (Connecting Overlapped Pair-End reads) is a method to align and connect the illumina sequenced Pair-End reads of which the insert size is smaller than the sum of the two read length.The connected reads can be used in genome assembly, resequencing and transcriptome research. The full citation: COPE: An accurate k-mer based pair-end reads connection tool to facilitate genome assembly Binghang Liu; Jianying Yuan; Siu-Ming Yiu; Zhenyu Li; Yinlong Xie; Yanxiang Chen; Yujian Shi; Hao Zhang... -
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Virastyar
Virastyar is an spell checker for low-resource languages
Virastyar is a free and open-source (FOSS) spell checker. It stands upon the shoulders of many free/libre/open-source (FLOSS) libraries developed for processing low-resource languages, especially Persian and RTL languages Publications: Kashefi, O., Nasri, M., & Kanani, K. (2010). Towards Automatic Persian Spell Checking. SCICT. Kashefi, O., Sharifi, M., & Minaie, B. (2013). A novel string distance metric for ranking Persian respelling suggestions. Natural Language Engineering, 19(2... -
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ZaznajSpoznaj
Project ZaznajSpoznaj is a mobile / web teaching support solution
Project ZaznajSpoznaj is a mobile / web solution, primarily intended for supporting teaching of blind and visually impaired pupils, but can also be used for broader audience like preschool children, K-12 children and other persons with vision problems. First part is intended for introducing blind or visually impaired youngsters with standards and adjusted accessories, for learning touch-typing and learning Braille symbols. Solution is useful for youngsters without vision problems, which want... -
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libsombrero
Astronomical object/structure detection from 1D and 2D data sets.
Sombrero is a fast wavelet image processing and object detection C library for astronomical images. Sombrero is named after the "Mexican Hat" shape of the wavelet masks used in image convolution and is released under the GNU LGPL library. -
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Subtractive Assembly
An approach for comparative metagenomics by assembling the differences
Subtractive Assembly is a de novo approach for comparative metagenomics by assembling the differential portion of reads directly. Given two metagenomic datasets A and B, subtractive assembly approach first identifies reads that are likely sampled from abundant or unique genomes in A (or B vice versa), using Bloom-filter based k-mer counting. And one can assemble only these reads separately using metagenomic assemblers such as IDBA-UD. We further developed concurrent subtractive assembly... -
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Trowel - Sequencing Error Corrector
Error Correction Module for Illumina Sequencing Reads
Trowel is an error correction module for Illumina sequencing reads, which is based on the k-mer spectrum approach. This tool is the first tool that uses a quality threshold instead of a coverage cutoff in order to extract trusted k-mers. This tool guarantees high accuracy and speed. This tool has been developed since 21. Jan. 2013 by Euncheon Lim in Prof. Dr. Detlef Weigel's Lab in Max-Planck Institute for Developmental Biology. First of all, you have to install the exact version of boost... -
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SummaRE
Konversi dini nilai rapor untuk tingkat SMA pengguna K-13.
SummaRE adalah sebuah aplikasi dini yang berfungsi untuk mengonversi nilai kecil (skala 1 - 4) menjadi nilai besar (1 - 100), serta mengukur kenaikan - kenaikan yang terjadi tiap semesternya untuk tiap mata pelajaran. Tersedia untuk 3 (tiga) peminatan, Matematika dan Ilmu - Ilmu Alam (MIA), Ilmu - Ilmu Sosial (IIS), dan Ilmu - Ilmu Bahasa (IIB). -
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K-Level 2.0 [revised]
An application of leveling network adjustment using Matlab
This is an application of leveling network adjustment based on Matlab. The method used in this application is least square adjustment. User can enter the leveling data directly or by reading a text file. -
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GenNet
A Tool for Qualitative and Quantitative Modeling of Gene Regulatory Ne
A Tool for Qualitative and Quantitative Modeling of Gene Regulatory Networks. GenNet is a Java based tool called that facilitate the model checking user by providing a unique GUI layout for both qualitative and quantitative modeling of GRNs. GenNet also assists the modeling users by providing some extra features i.e. CTL editor, parameters filtering and input/output files management. Download pre-installed GenNet Virtual Box Image here...