4. I open the GBrowse viewer and click the first contig.
II. Expected output and actual output:
1. I expect to see something like the following:
Name: Contig0.1
Class: Contig
Type: contig
Description:
Source: PCAP
Position: Super0:18575..22510 (+ strand)
Length: 3936
>Contig0.2 class=Contig position=Super0:18575..22510 (+ strand)
GCAGCCCCCT TTGGCGTCCA TGTACGAGGT GCCTCTGTGG...
In GBrowse, when I click on the first contig of any supercontig the result is a blank page. When I click on any other contig the result is as expected.
I. I reproduce the bug as follows:
1. Using a supercontigs fasta file like the following:
>Super0 706929 725932
CACCGATGCATATAAGAGGTGTGTCTGAGTGTGCTCTGCTGCATTATACCTTAAGCTCCT...