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Posted a comment on discussion General Discussion on Transcriptome Assembly
I am trying to assembly a test dataset consisting of 20 million PE reads. /share/BinPacker_binary/BinPacker...
8 years ago
Posted a comment on discussion General Discussion on Transcriptome Assembly
Im pretty sure this was the final output - but anyway let me see if I can reproduce....
8 years ago
Modified a comment on discussion General Discussion on Transcriptome Assembly
assemblies contain duplicate names. /share/BinPacker_binary/BinPacker -s fq -p pair...
9 years ago
Posted a comment on discussion General Discussion on Transcriptome Assembly
/share/BinPacker_binary/BinPacker -s fq -p pair -l ../reads/1.subsamp_1.fastq -r...
9 years ago
Posted a comment on discussion General Discussion on Transcriptome Assembly
on ubuntu 14.04 also, 'binary' version linked to in paper required compilation......
9 years ago
Created ticket #318 on Whole-Genome Shotgun Assembler
fail in 7-2-CGW
9 years ago
Created ticket #313 on Whole-Genome Shotgun Assembler
delete partial cgw checkpoints
9 years ago
Posted a comment on ticket #140 on Whole-Genome Shotgun Assembler
sorry - I think I posted thsi in the wrong section, but as far as I can tell there...
9 years ago

Matt MacManes