Sort methods based on the entire signature

Would it be possible to have Jalopy sort methods based
on the entire signature of the method?
I am trying to plug Jalopy into Scooter Software’s
Beyond Compare utility. Beyond compare has the ability
to call external programs to format files before
comparing them. I am using Beyond Compare java class
rules which calls the jad decompiler when comparing
*.class files. I want to take this a step further and
have Jalopy sort the methods. Without the ability to
sort methods the compare results are not very helpful.
I was able to get Beyond Compare to use Jalopy.
However, Jalopy does not seem to sort the methods if
they have the same name.