Latest Codes on GitHub:
https://github.com/aquaskyline/SOAPdenovo-Trans

SOAPdenovo-Trans is a de novo transcriptome assembler inherited from the SOAPdenovo2 framework, designed for assembling transcriptome with alternative splicing and different expression level. The assembler provides a more comprehensive way to construct the full-length transcript sets compare to SOAPdenovo2.

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Categories

Bio-Informatics

License

GNU General Public License version 3.0 (GPLv3)

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  • wkretzsch Posted 2018-01-12
    I tried to run this program on a pair of fastqs, but I got a core dump and no error message :/
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Additional Project Details

Operating Systems

Linux, BSD

Languages

English, Chinese (Traditional), Chinese (Simplified)

Intended Audience

Advanced End Users, Developers

User Interface

Console/Terminal

Programming Language

C++, C

Related Categories

C++ Bio-Informatics Software, C Bio-Informatics Software

Registered

2013-05-14
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