SeqWare

SeqWare has moved to GitHub, see https://github.com/SeqWare

SeqWare is a project to create a tool set to work with next generation genome sequencers (SOLiD & Illumina). It includes a LIMS, Pipeline, and Query Engine. Check out the wiki link below to see documentation. You can get the source from the Develop link.

Project Activity

See All Activity >

License

GNU General Public License version 2.0 (GPLv2)

Follow SeqWare

SeqWare Web Site

Other Useful Business Software

Save Up to 91% on Cloud Compute With Spot VMs

Automatic sustained-use discounts. One free VM per month. No negotiation needed.

Run batch jobs at 60-91% off with Spot VMs. Long-running workloads get automatic discounts with sustained use.

Start Free

Rate This Project

User Reviews

Be the first to post a review of SeqWare!

Additional Project Details

Operating Systems

Linux

Intended Audience

Science/Research

Programming Language

Java, Perl

Related Categories

Perl Bio-Informatics Software, Java Bio-Informatics Software

Registered

2008-09-10

Similar Business Software

Genome Analysis Toolkit (GATK)

Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. The GATK...

See Software
OmnibusX

In the world of biological data science, navigating vast and complex datasets can be a daunting task. Our software toolkit is designed to empower you by accelerating analysis, promoting accessibility, and providing comprehensive visualization tools to help you make sense of these intricate...

See Software
Illumina Connected Analytics

Store, archive, manage, and collaborate on multi-omic datasets. Illumina Connected Analytics is a secure genomic data platform to operationalize informatics and drive scientific insights. Easily import, build, and edit workflows with tools like CWL and Nextflow. Leverage DRAGEN bioinformatics...

See Software
BaseSpace Sequence Hub

Data management and simplified bioinformatics for labs getting started and for rapidly scaling next-generation sequencing (NGS) operations. As a key component of the BaseSpace Suite, BaseSpace Sequence Hub is a direct extension of your Illumina instruments. Encrypted data flow from the...

See Software
GenomeBrowse

This free tool delivers stunning visualizations of your genomic data that give you the power to see what is occurring at each base pair in your samples. GenomeBrowse runs as a native desktop application on your computer. No longer do you have to sacrifice speed and interface quality to obtain a...

See Software
Illumina DRAGEN Secondary Analysis

The Illumina DRAGEN Secondary Analysis provides accurate, comprehensive, and efficient analysis of next-generation sequencing data. Graph reference genome and machine learning driving unprecedented accuracy. Provides ultra-efficient workflow; can fully process a 34x whole human genome in ~30...

See Software

Report inappropriate content