The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
Features
- Database Search Engines (comet etc.)
- SpecraST (Spectrum Library Search Engine)
- Open-mass Search (Magnum etc.)
- Kojak (Crosslinking Search)
- DDA Analysis
- DISCo (DIA Analysis)
- reSpect (Chimeric Spectrum Analysis)
- MS1 and MS2 Quantitation Labelled and Unlabelled
- Decoy Database Generation
- PeptideProphet (PSM Level Validation)
- iProphet (Peptide Level Validation)
- PTMProphet (Post-Translational Modification Validation)
- Protein Level Validation
- Spectrum Library Generation
- Data Visualization Tools
- Retention Time Cataloging and Prediction
License
GNU Library or Lesser General Public License version 2.0 (LGPLv2), GNU General Public License version 2.0 (GPLv2)Follow SASHIMI
You Might Also Like
ManageEngine's Endpoint Central is a Unified Endpoint Management Solution, that takes care of enterprise mobility management (including all features of mobile application management and mobile device management), as well as client management for a diversified range of endpoints - mobile devices, laptops, computers, tablets, server machines etc. With ManageEngine Endpoint Central, users can automate their regular desktop management routines like distributing software, installing patches, managing IT assets, imaging and deploying OS, and more.