This site hosts code investigating the role of spatial heterogeneity in biochemical signaling. Motivated by several biological examples, we study the behavior of covalent modification networks when the activating component is localized to a planar membrane in either a random or clustered configuration. Reactions and diffusion are implemented on a three-dimensional lattice.

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Categories

Physics

License

GNU General Public License version 2.0 (GPLv2)

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Additional Project Details

Intended Audience

Science/Research

Programming Language

C++, MATLAB, Perl

Related Categories

MATLAB Physics Software, Perl Physics Software, C++ Physics Software

Registered

2011-12-11