readFilter

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Last Update: 2016-08-01

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Filters DNA sequence files based on length, N-content, and occurrence of a QC reference sequence (fasta or fasta+qual formats)

Features

Filters a DNA fasta (+qual) file based on quality hallmarks
Removes sequences not containing a known QC sequence (primer, adapter, barcode)
Removes sequences not meeting length requirements
Removes sequences with too many N's

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Registered

2011-04-13

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