Pharmer Discussion

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Topic	Posts	Views	Last Post
How to use Pharmer to create a consensus ph.json for multiple ligands? By JONAS_Li on Mon Dec 01, 2025 06:30 AM	2	7	By David Koes on Mon Dec 01, 2025 01:02 PM
load_query Pymol plugin help By Matthew Baumgartner on Tue Aug 28, 2012 09:36 PM	10	1029	By David Koes on Tue Jun 03, 2025 04:13 PM
Inconsistent input and output from dbsearch By Jiafeng Liao on Mon Jul 08, 2019 08:41 AM	23	388	By JonasLi on Mon Mar 24, 2025 07:58 AM
database creation failed By Angamba on Tue Oct 21, 2014 12:41 PM	12	634	By David Koes on Fri Feb 07, 2025 03:58 PM
Issues with running the static-executeable By Pir Wlan on Mon Feb 24, 2020 08:07 AM	6	541	By JonasLi on Fri Feb 07, 2025 07:24 AM
Warning: Invalid Input. Sequential molecules with the same name shoul... By JonasLi on Fri Feb 07, 2025 05:51 AM	1	26	By JonasLi on Fri Feb 07, 2025 05:51 AM
Error with zincpharmer By Srinjana raha on Sat Nov 19, 2022 04:55 PM	2	141	By David Koes on Sat Nov 19, 2022 09:45 PM
New to Pharmer, doesn't seem to be working By David Johnson on Sat Feb 19, 2022 12:05 AM	4	319	By David Koes on Tue Feb 22, 2022 04:14 PM
Mismatch in protonation states By Himanshu Goel on Tue Aug 10, 2021 08:05 PM	2	187	By David Koes on Tue Aug 10, 2021 10:36 PM
(no subject) By Nilesh Bajad on Mon Aug 31, 2020 06:23 AM	2	207	By David Koes on Mon Aug 31, 2020 01:46 PM
Pharmer User Manual/ Pharmacophore By Bilal Nizami on Wed Jun 21, 2017 10:19 AM	7	1959	By Gautam Bhardwaj on Mon Aug 24, 2020 04:57 PM
Interaction pharmacophore generation By Sulee on Tue Nov 19, 2019 05:54 PM	3	310	By Sulee on Tue Nov 19, 2019 07:22 PM
Comparing two json pharmacophores By Sulee on Tue Oct 29, 2019 10:06 PM	4	270	By David Koes on Thu Nov 14, 2019 08:08 PM
Visualise query and result By Jiafeng Liao on Tue Jun 18, 2019 12:48 PM	6	263	By Jiafeng Liao on Wed Jun 26, 2019 02:24 AM
svn URL invalid By Jiafeng Liao on Thu Jun 06, 2019 09:01 AM	8	573	By Jiafeng Liao on Wed Jun 12, 2019 05:48 AM
Normalized RMSD By ab on Wed Mar 20, 2019 10:57 AM	2	230	By David Koes on Wed Mar 20, 2019 02:16 PM
How to download Pharmer By Lereze Marais on Mon Jan 14, 2019 07:43 AM	2	387	By David Koes on Mon Jan 14, 2019 01:16 PM
Compiling the code By David Koes on Wed Jun 08, 2011 01:11 PM	81	9122	By David Koes on Mon Jun 25, 2018 03:50 PM
Can I use an MOE's ph4 as the pharmacophore By Miro on Fri Apr 15, 2016 03:34 PM	11	1090	By Miro on Tue Apr 19, 2016 02:06 PM
Creating custom pharmacophore specifications By David Koes on Thu Sep 20, 2012 04:39 PM	25	3558	By David Koes on Tue Jan 27, 2015 10:09 PM
pharmacophore json file By robwow on Mon Nov 03, 2014 03:58 PM	2	577	By David Koes on Mon Nov 03, 2014 06:26 PM
pharmer output format By fralium on Wed Aug 06, 2014 09:29 PM	2	523	By David Koes on Wed Aug 06, 2014 09:39 PM
parameters By Danzhi Huang on Thu Jun 20, 2013 11:21 AM	2	611	By David Koes on Thu Jun 20, 2013 12:09 PM
mmap failed By Colliandre Lionel on Tue Sep 04, 2012 10:39 AM	11	1828	By Colliandre Lionel on Thu Sep 06, 2012 11:50 AM
Using the precompiled binary By David Koes on Tue Jun 12, 2012 01:30 PM	10	1303	By SHAMEER PILLARISETTI on Sat Aug 11, 2012 09:27 AM

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