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NGSEP Files

NGSEP (Next Generation Sequencing Experience Platform)

Brought to you by: dfcruz00, jduitama, juandelahoz

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Name	Modified	InfoDownloads / Week
GUIFX	2025-05-27	2
Library	2025-05-27	0
SourceCode	2025-05-27	3
training	2024-07-02	0
benchmarkAssembler	2023-01-11	0
Eclipse+Plugin	2019-07-13	0
OnlyPlugin	2019-07-13	0
Totals: 7 Items		5

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Recommended Projects

Bowtie
Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
SAM tools
SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format. The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools
snpEff
snpEff is a fast variant effect predictor (SNP, MNP and InDels) for genomic data. It is integrated with Galaxy so it can be used either as a command line or as a web application.
coronavirus
The coronavirus dataset

NGSEP Files

NGSEP (Next Generation Sequencing Experience Platform)

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