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Programming Languages: C

License: GNU General Public License version 2.0 (GPLv2)

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browse code, statistics, last commit on 2012-02-07 svn co https://mrbayes.svn.sourceforge.net/svnroot/mrbayes mrbayes

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  • make throws following error

    :~/Downloads/mrbayes_3.2.1/src$ make mpicc -O3 -ffast-math -Wall -DNDEBUG -I/home/haldane/include/libhmsbeagle-1 -DUSECONFIG_H -L/home/haldane/lib -lhmsbeagle -lreadline -lm mb.c bayes.o command.o mbmath.o mcmc.o model.o plot.o sump.o sumt.o tree.o utils.o mbbeagle.o best.o -o mb bayes.o: In function `CommandLine': bayes.c:(.text+0x1d5): undefined reference to `readline'...

    2012-05-21 22:11:51 PDT by crd1859

  • LG in mrbayes 3.2

    I want to select LG model in mrbayes, but this model is not implemented in mrbayes. Could anyone help me?.

    2012-05-21 19:35:33 PDT by young2304

  • odd behavior in parallel mrbayes

    Hello everyone, I'm working with an HIV dataset and I've recently installed the parallel version of MrBayes. I obtained very strange results after running this version. The consensus tree was star-like and there with virtually no support for any clades. References sequences including A, D, and C subtypes were included in the analysis so this was unexpected. I ran the exact same...

    2012-05-20 16:43:59 PDT by mgrabows

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    2012-05-18 14:02:23 PDT by nobody

  • Install failed/stalled with MPI and Beagle

    Instillation of MrBayes fails/stals after 'make' command. Instillation is successful on other computer when installing without MPI enabled or the beagle library. See below for details. papios-mac-pro:~ Papio$ tar -xzvf mrbayes-3.2.1.tar.gz x mrbayes_3.2.1/ x mrbayes_3.2.1/examples/ x mrbayes_3.2.1/examples/primates.nex x mrbayes_3.2.1/examples/cynmix.nex x...

    2012-05-16 09:03:57 PDT by nataliejameson

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    2012-05-11 10:08:01 PDT by nobody

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    2012-05-08 19:55:44 PDT by nobody

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