IMAS is a Visual Analytics system for the discovery of knowledge in genomic information. IMAS enables genomic scientists to rapidly analyze and visualize a set of microbial genomic sequences using tools such as Glimmer, Blast, Clustal-W, Primer3.

Features

  • Zoomable User Interface -- Fast!
  • Runs analysis programs locally (Blast, Glimmer, Clustal...)
  • IMAS Blast can search NCBI nr database
  • Runs HMMPfam on local copy of Pfam data
  • Can create Blast DBs from INSDSeq XML files

Project Samples

IMAS (labeled): Gene -> AA & NT BLAST -> NT ClustalW

Project Activity

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Categories

Bio-Informatics, Data Visualization

License

GNU General Public License version 3.0 (GPLv3)

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IMAS - Genomic Analysis & Visualization Web Site

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Additional Project Details

Operating Systems

Mac, Windows

Languages

English

Intended Audience

Science/Research

User Interface

OpenGL, wxWidgets

Programming Language

C++

Database Environment

XML-based

Related Categories

C++ Bio-Informatics Software, C++ Data Visualization Software

Registered

2009-10-09
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