GPU3SNP

GPU3SNP is a multi-GPU tool that exhaustively analyzes case-control datasets looking for 3-SNP combinations that present epistatic interaction. It provides a list with the combinations that have higher Mutual Information, which is used as measure for interaction. It is parallelized using CUDA and can exploit several GPUs in the same node/system.

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License

GNU General Public License version 3.0 (GPLv3)

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Additional Project Details

Intended Audience

Healthcare Industry, Information Technology, Science/Research

User Interface

Command-line, Console/Terminal

Programming Language

C++

Related Categories

C++ Bio-Informatics Software

Registered

2014-11-28

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