AcidMiner

Toolkit to examine the topology of a phylogenetic tree, place amino acid substitutions on specific branches, polarize them and compare amino acid sequences of homologous proteins to answer a wide range of questions about protein evolution.

Features

Compare amino acid sequences of homologous proteins
Examine topology of a phylogenetic tree
Analyze amino-acid substitutions
Analyze frequency and radicalism of substitutions in duplicated and single genes

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License

BSD License

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Additional Project Details

Intended Audience

Science/Research

User Interface

Console/Terminal, Web-based

Programming Language

Java

Database Environment

JDBC, Other API

Related Categories

Java Bio-Informatics Software

Registered

2010-01-25

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