MIREAP is a tool which can be used to identify both known and novel microRNAs from small RNA libraries deeply sequenced by Solexa/454/Solid technology.

Project Activity

See All Activity >

Categories

Bio-Informatics

License

GNU General Public License version 2.0 (GPLv2)

Follow MicroRNA Discovery By Deep Sequencing

MicroRNA Discovery By Deep Sequencing Web Site

nel_h2
Simply solve complex auth. Easy for devs to set up. Easy for non-devs to use. Icon
Simply solve complex auth. Easy for devs to set up. Easy for non-devs to use.

Transform user access with Frontegg CIAM: login box, SSO, MFA, multi-tenancy, and 99.99% uptime.

Custom auth drains 25% of dev time and risks 62% more breaches, stalling enterprise deals. Frontegg platform delivers a simple login box, seamless authentication (SSO, MFA, passwordless), robust multi-tenancy, and a customizable Admin Portal. Integrate fast with the React SDK, meet compliance needs, and focus on innovation.
Start for Free
Rate This Project
Login To Rate This Project

User Ratings

★★★★★
★★★★
★★★
★★
1
0
0
0
0
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5

User Reviews

  • At first I was skeptical that there was very little documentation, and things got worse when my jobs produced an empty results file without any error messages to troubleshoot the issues. Then I took a close look at the supplied test files and tried to match the format completely and then finally got it to work. Generating the "map.txt" file took a while and I don't see why the mireap can't directly use sam files. I must say the results are absolutely worth the effort in generating the "map.txt" file and troubleshooting other issues. The output files show regions of the genome which express microRNA that we can now test with PCR. With more documentation and helpful error messages, this software could be really good.
Read more reviews >

Additional Project Details

Languages

English

User Interface

Command-line

Programming Language

Perl

Related Categories

Perl Bio-Informatics Software

Registered

2008-10-20