DownloadThe Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
Features
- Database Search Engines (comet etc.)
- SpecraST (Spectrum Library Search Engine)
- Open-mass Search (Magnum etc.)
- Kojak (Crosslinking Search)
- DDA Analysis
- DISCo (DIA Analysis)
- reSpect (Chimeric Spectrum Analysis)
- MS1 and MS2 Quantitation Labelled and Unlabelled
- Decoy Database Generation
- PeptideProphet (PSM Level Validation)
- iProphet (Peptide Level Validation)
- PTMProphet (Post-Translational Modification Validation)
- Protein Level Validation
- Spectrum Library Generation
- Data Visualization Tools
- Retention Time Cataloging and Prediction
Project Samples
License
GNU Library or Lesser General Public License version 2.0 (LGPLv2), GNU General Public License version 2.0 (GPLv2)Follow SASHIMI
You Might Also Like
ConnectWise CPQ, formerly ConnectWise Sell, is a professional quote and proposal automation software for IT solution providers. ConnectWise CPQ offers a wide range of tools that enables IT solution providers to save time, quote more, and win big. Top features include professional quote or proposal templates, product catalog and sourcing, workflow automation, sales reporting, and integrations with best-in-breed solutions like Cisco, Dell, HP, and Salesforce.