From: Thomas E. <te...@gm...> - 2014-03-04 21:25:08
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Hi, Is there some command that deactivates an object, namely something equivalent to clicking on an object name at the object panel? I am loading multiple files and render them as sticks but the memory overflows. If there was a command to keep the stick representation but deactivate the object (hide it) then I could visualize the structures one by one once they are all loaded -which is actually what I want. thanks, Thomas -- ====================================================================== Thomas Evangelidis PhD student University of Athens Faculty of Pharmacy Department of Pharmaceutical Chemistry Panepistimioupoli-Zografou 157 71 Athens GREECE email: te...@ph... te...@gm... website: https://sites.google.com/site/thomasevangelidishomepage/ |
From: Thomas H. <tho...@sc...> - 2014-03-04 22:03:19
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Hi Thomas, sure, it's "enable" and "disable". http://pymolwiki.org/index.php/Enable http://pymolwiki.org/index.php/Disable Cheers, Thomas On 04 Mar 2014, at 13:25, Thomas Evangelidis <te...@gm...> wrote: > Hi, > > Is there some command that deactivates an object, namely something equivalent to clicking on an object name at the object panel? I am loading multiple files and render them as sticks but the memory overflows. If there was a command to keep the stick representation but deactivate the object (hide it) then I could visualize the structures one by one once they are all loaded -which is actually what I want. > > thanks, > Thomas > > -- > ====================================================================== > Thomas Evangelidis > PhD student > University of Athens > Faculty of Pharmacy > Department of Pharmaceutical Chemistry > Panepistimioupoli-Zografou > 157 71 Athens > GREECE > email: te...@ph... > te...@gm... > > website: https://sites.google.com/site/thomasevangelidishomepage/ -- Thomas Holder PyMOL Developer Schrödinger, Inc. |
From: Jordan W. <jwi...@gm...> - 2014-03-04 22:26:13
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A super hack way is this: hide all python my_list = cmd.get_object_list() # gets all objects loaded index = 0 def next_thing(): global index cmd.show('sticks', my_list[index]) cmd.hide('sticks', my_list[index - 1]) index += 1 def last_thing(): global index index -= 1 cmd.show('sticks', my_list[index - 1]) cmd.hide('sticks', my_list[index]) cmd.extend('next_thing', next_thing) cmd.extend('last_thing', last_thing) python end Then you can type “next_thing” or “last_thing” to cycle through your objects. Jordan On Mar 4, 2014, at 4:03 PM, Thomas Holder <tho...@sc...> wrote: > Hi Thomas, > > sure, it's "enable" and "disable". > > http://pymolwiki.org/index.php/Enable > http://pymolwiki.org/index.php/Disable > > Cheers, > Thomas > > On 04 Mar 2014, at 13:25, Thomas Evangelidis <te...@gm...> wrote: > >> Hi, >> >> Is there some command that deactivates an object, namely something equivalent to clicking on an object name at the object panel? I am loading multiple files and render them as sticks but the memory overflows. If there was a command to keep the stick representation but deactivate the object (hide it) then I could visualize the structures one by one once they are all loaded -which is actually what I want. >> >> thanks, >> Thomas >> >> -- >> ====================================================================== >> Thomas Evangelidis >> PhD student >> University of Athens >> Faculty of Pharmacy >> Department of Pharmaceutical Chemistry >> Panepistimioupoli-Zografou >> 157 71 Athens >> GREECE >> email: te...@ph... >> te...@gm... >> >> website: https://sites.google.com/site/thomasevangelidishomepage/ > > > -- > Thomas Holder > PyMOL Developer > Schrödinger, Inc. > > > ------------------------------------------------------------------------------ > Subversion Kills Productivity. Get off Subversion & Make the Move to Perforce. > With Perforce, you get hassle-free workflows. Merge that actually works. > Faster operations. Version large binaries. Built-in WAN optimization and the > freedom to use Git, Perforce or both. Make the move to Perforce. > http://pubads.g.doubleclick.net/gampad/clk?id=122218951&iu=/4140/ostg.clktrk > _______________________________________________ > PyMOL-users mailing list (PyM...@li...) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pym...@li... |