From: <ag...@po...> - 2005-07-24 19:15:06
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Hello! I'm again writing about the same problem. Is there any way to get the frames of the animated zoom, center, or orient? I tried through python and it didn't work, then I tried to do it directly from pymol with the following commands: mclear mset 1 x100 mdo 1:load 1aoi.pdb mdo 10: hide everything, all mdo 20: show cartoon, 1aoi mdo 30: move x, -50; move y, -50 mdo 50: orient visible, animate=3 mpng frames/frame and it's still not working. I get the frames up to 49th and then it says "MoviePNG-Error: Missing rendered image". Is there anyone who can help me this time? I would really appreciate, thanks! Aga |
From: andrea s. <and...@gm...> - 2005-07-25 13:40:33
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Hi all, I am using pymol also for python scripting and perlmol for perl scripting. They are both very nice. I am just wondering if there are some other useful python modules around for chemistry. Sorry for the OT. Regards, andrea |
From: Jerome P. <j.p...@pa...> - 2005-07-25 14:15:44
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Hello, You can find modules inside some software package, like: PyQuante (http://pyquante.sourceforge.net/) =46ROWNS (http://frowns.sourceforge.net/) MMTK (http://starship.python.net/crew/hinsen/MMTK/) All these software are free software. Regards, Jerome PANSANEL =2D- Jerome PANSANEL http://www.alchem.org Le Lundi 25 Juillet 2005 15:42, andrea spitaleri a =E9crit=A0: > Hi all, > I am using pymol also for python scripting and perlmol for perl > scripting. They are both very nice. > I am just wondering if there are some other useful python modules > around for chemistry. > Sorry for the OT. > > Regards, > > andrea > > > > > ------------------------------------------------------- > SF.Net email is sponsored by: Discover Easy Linux Migration Strategies > from IBM. Find simple to follow Roadmaps, straightforward articles, > informative Webcasts and more! Get everything you need to get up to > speed, fast. http://ads.osdn.com/?ad_id=3D7477&alloc_id=3D16492&op=3Dclick > _______________________________________________ > PyMOL-users mailing list > PyM...@li... > https://lists.sourceforge.net/lists/listinfo/pymol-users |
From: andrea s. <and...@gm...> - 2005-07-25 14:37:56
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<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"> <html> <head> <meta content="text/html;charset=ISO-8859-1" http-equiv="Content-Type"> <title></title> </head> <body bgcolor="#ffffff" text="#000000"> Hi <br> thanks to all for the links.<br> and something a bit closer to pymol? more focused on biological files...<br> <br> thanks again<br> <br> Regards<br> andrea<br> Jerome PANSANEL wrote: <blockquote cite="mid...@pa..." type="cite"> <pre wrap="">Hello, You can find modules inside some software package, like: PyQuante (<a class="moz-txt-link-freetext" href="http://pyquante.sourceforge.net/">http://pyquante.sourceforge.net/</a>) FROWNS (<a class="moz-txt-link-freetext" href="http://frowns.sourceforge.net/">http://frowns.sourceforge.net/</a>) MMTK (<a class="moz-txt-link-freetext" href="http://starship.python.net/crew/hinsen/MMTK/">http://starship.python.net/crew/hinsen/MMTK/</a>) All these software are free software. Regards, Jerome PANSANEL -- Jerome PANSANEL <a class="moz-txt-link-freetext" href="http://www.alchem.org">http://www.alchem.org</a> Le Lundi 25 Juillet 2005 15:42, andrea spitaleri a écrit : </pre> <blockquote type="cite"> <pre wrap="">Hi all, I am using pymol also for python scripting and perlmol for perl scripting. They are both very nice. I am just wondering if there are some other useful python modules around for chemistry. Sorry for the OT. Regards, andrea ------------------------------------------------------- SF.Net email is sponsored by: Discover Easy Linux Migration Strategies from IBM. Find simple to follow Roadmaps, straightforward articles, informative Webcasts and more! Get everything you need to get up to speed, fast. <a class="moz-txt-link-freetext" href="http://ads.osdn.com/?ad_id=7477&alloc_id=16492&op=click">http://ads.osdn.com/?ad_id=7477&alloc_id=16492&op=click</a> _______________________________________________ PyMOL-users mailing list <a class="moz-txt-link-abbreviated" href="mailto:PyM...@li...">PyM...@li...</a> <a class="moz-txt-link-freetext" href="https://lists.sourceforge.net/lists/listinfo/pymol-users">https://lists.sourceforge.net/lists/listinfo/pymol-users</a> </pre> </blockquote> <pre wrap=""><!----> ------------------------------------------------------- SF.Net email is sponsored by: Discover Easy Linux Migration Strategies from IBM. Find simple to follow Roadmaps, straightforward articles, informative Webcasts and more! Get everything you need to get up to speed, fast. <a class="moz-txt-link-freetext" href="http://ads.osdn.com/?ad_idt77&alloc_id492&op=click">http://ads.osdn.com/?ad_idt77&alloc_id492&op=click</a> _______________________________________________ PyMOL-users mailing list <a class="moz-txt-link-abbreviated" href="mailto:PyM...@li...">PyM...@li...</a> <a class="moz-txt-link-freetext" href="https://lists.sourceforge.net/lists/listinfo/pymol-users">https://lists.sourceforge.net/lists/listinfo/pymol-users</a> </pre> </blockquote> <br> </body> </html> |