From: Daniel J. R. <da...@ce...> - 2003-02-05 11:26:05
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Hi everyone I'm trying to make a figure of a superposition of various loops, each with a different colour. I need a slim trace of the loops so that each may be seen clearly. In normal view I can control the loop width using either cartoon_loop_radius or ribbon_width, depending on whether I display cartoon or width. Ray-tracing looks prettier but I find that even traces that are very slim in normal view get converted to a fairly fat tube on ray-tracing. Is there any way to control this? Thanks very much in advance Daniel +-------------------------------------------------------------------------+ | Dr Daniel John Rigden | | CENARGEN/EMBRAPA | e-mail: da...@ce... | | Parque Estacao Biologica | http://www.cenargen.embrapa.br | | PqEB - Final - Av. W3 Norte | Phone: +55 (61)448-4741 | | 70770-900, Brasilia-D.F.-BRAZIL | Fax: +55 (61)340-3658 | +-------------------------------------------------------------------------+ |
From: Robert C. <rl...@po...> - 2003-02-05 16:24:13
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Hi, * Daniel John Rigden <da...@ce...> [2003-02-05 09:23] wrote: > I'm trying to make a figure of a superposition of various loops, each with > a different colour. I need a slim trace of the loops so that each may be > seen clearly. > > In normal view I can control the loop width using either > cartoon_loop_radius or ribbon_width, depending on whether I display > cartoon or width. Ray-tracing looks prettier but I find that even traces Try ribbon_radius, rather than ribbon_width. The former is for ray traced ribbon "tubes" and the latter is for the non-ray traced, interactive representation. Cheers, Robert -- Robert L. Campbell, Ph.D. rl...@po... Senior Research Associate phone: 613-533-6821 Dept. of Biochemistry, Queen's University, fax: 613-633-2497 Kingston, ON K7L 3N6 Canada PGP Fingerprint: 9B49 3D3F A489 05DC B35C 8E33 F238 A8F5 F635 C0E2 (out of date web site:http://biophysics.med.jhmi.edu/rlc) |
From: Daniel J. R. <da...@ce...> - 2003-02-05 16:40:33
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Thanks Robert, works a treat. I though I'd tried all the obvious looking parameters but that one slipped through. Cheers Dan +-------------------------------------------------------------------------+ | Dr Daniel John Rigden | | CENARGEN/EMBRAPA | e-mail: da...@ce... | | Parque Estacao Biologica | http://www.cenargen.embrapa.br | | PqEB - Final - Av. W3 Norte | Phone: +55 (61)448-4741 | | 70770-900, Brasilia-D.F.-BRAZIL | Fax: +55 (61)340-3658 | +-------------------------------------------------------------------------+ On Wed, 5 Feb 2003, Robert Campbell wrote: > Hi, > > * Daniel John Rigden <da...@ce...> [2003-02-05 09:23] wrote: > > I'm trying to make a figure of a superposition of various loops, each with > > a different colour. I need a slim trace of the loops so that each may be > > seen clearly. > > > > In normal view I can control the loop width using either > > cartoon_loop_radius or ribbon_width, depending on whether I display > > cartoon or width. Ray-tracing looks prettier but I find that even traces > > Try ribbon_radius, rather than ribbon_width. The former is for ray > traced ribbon "tubes" and the latter is for the non-ray traced, > interactive representation. > > Cheers, > Robert > -- > Robert L. Campbell, Ph.D. rl...@po... > Senior Research Associate phone: 613-533-6821 > Dept. of Biochemistry, Queen's University, fax: 613-633-2497 > Kingston, ON K7L 3N6 Canada > PGP Fingerprint: 9B49 3D3F A489 05DC B35C 8E33 F238 A8F5 F635 C0E2 > (out of date web site:http://biophysics.med.jhmi.edu/rlc) > > > ------------------------------------------------------- > This SF.NET email is sponsored by: > SourceForge Enterprise Edition + IBM + LinuxWorld = Something 2 See! > http://www.vasoftware.com > _______________________________________________ > PyMOL-users mailing list > PyM...@li... > https://lists.sourceforge.net/lists/listinfo/pymol-users > |