From: Oganesyan, V. <OganesyanV@MedImmune.com> - 2013-09-03 18:07:17
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PyMOLers, Upon ray-tracing PyMOL v1.6.0.0 (Linux 64 bit) changes the color and the mesh line width of the electron density maps. How can I disable this metamorphosis? Thank you. Vaheh To the extent this electronic communication or any of its attachments contain information that is not in the public domain, such information is considered by MedImmune to be confidential and proprietary. This communication is expected to be read and/or used only by the individual(s) for whom it is intended. If you have received this electronic communication in error, please reply to the sender advising of the error in transmission and delete the original message and any accompanying documents from your system immediately, without copying, reviewing or otherwise using them for any purpose. Thank you for your cooperation. |
From: Thomas H. <tho...@sc...> - 2013-09-04 13:58:50
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Hi Vaheh, there should be no color difference, apart from lighting effects. Ray tracing always draws cylinders for mesh, real-time rendering supports lines and cylinders. Real-time rendering and ray tracing should be almost identical with these settings: PyMOL> set use_shaders PyMOL> set mesh_as_cylinders PyMOL> unset mesh_radius PyMOL> unset ray_shadow Notes: - mesh_radius only applies to ray tracing and only if not 0.0, use mesh_width to control for both rendering engines equally - mesh_as_cylinders only available with shaders If you still don't get the same, please send screenshots. Cheers, Thomas Oganesyan, Vaheh wrote, On 09/03/13 19:47: > PyMOLers, > > Upon ray-tracing PyMOL v1.6.0.0 (Linux 64 bit) changes the color and > the mesh line width of the electron density maps. How can I disable > this metamorphosis? > > Thank you. > > Vaheh -- Thomas Holder PyMOL Developer Schrödinger Contractor |