I am trying to automatically export TreeView Images to png pictures, but it just won't work for me!? Maybe I am doing something wrong and I would be very glad if someone could help me on this. I am getting a bit desperate :-).
To give one example: my clustered data matrix has 44 rows and 6 columns. This is the command I use:
java -jar TreeView.jar -r ./mydata.cdt -x Dendrogram - -o ./mydata.png -s 5x10 -a 0 -b -c 2
The error I get is (in this example): 'Dendrogram export had problem java.lang.IllegalArgumentException: Width (0) and height (-2147483479) cannot be <= 0'. With other examples the numbers in the message vary.
I use TreeView-1.1.5r2. It had worked before, so in theory it can work (also for me). I just don't really get the error message.
Many thanks in advance,
best wishes,
Katrin.
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:
Anonymous
-
2010-09-07
Maybe I should add that simply opening the file goes ahead fine! Only the export has the problem.
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:
I am trying to automatically export TreeView Images to png pictures, but it just won't work for me!? Maybe I am doing something wrong and I would be very glad if someone could help me on this. I am getting a bit desperate :-).
To give one example: my clustered data matrix has 44 rows and 6 columns. This is the command I use:
java -jar TreeView.jar -r ./mydata.cdt -x Dendrogram - -o ./mydata.png -s 5x10 -a 0 -b -c 2
The error I get is (in this example): 'Dendrogram export had problem java.lang.IllegalArgumentException: Width (0) and height (-2147483479) cannot be <= 0'. With other examples the numbers in the message vary.
I use TreeView-1.1.5r2. It had worked before, so in theory it can work (also for me). I just don't really get the error message.
Many thanks in advance,
best wishes,
Katrin.
Maybe I should add that simply opening the file goes ahead fine! Only the export has the problem.
Your command line works fine with some example files I have. Could you post a file with the problem in a new bug report in the tracker:
https://sourceforge.net/tracker/?group_id=84593&atid=573298
The interface can be a little confusing, just click "Add new" in the upper left and fill out the form.
Ok, thank you. I have done so. Many thanks for your effort and help!