From: <nve...@cl...> - 2005-01-31 14:45:11
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<=21DOCTYPE HTML PUBLIC =22-//W3C//DTD HTML 4.01 Transitional//EN=22> <HTML> <HEAD><TITLE></TITLE> <STYLE> body, table, tr, td, p =7Bfont-family: Verdana;font-size:12px;margin: 0px = 0px 0px 0px=7D =2Ebgtabl =7BBACKGROUND-REPEAT: no-repeat=7D </STYLE> </HEAD> <BODY bgProperties=3D=22fixed=22 bgcolor=3D=22=23FFFFFF=22 background=3D=22= http://flashimg.club-internet.fr/flashmail/vide.gif=22> <P><BR>De: Egon Willighagen <E.WILLIGHAGEN=40SCIENCE.RU.NL><BR>>all the= FAH files do not have structure information; no info on residue name, <BR= >>nor what carbons are the alpha carbons... <BR>> <BR>>I know you= 've been looking at secondary structure detection, but what about <BR>>= alpha carbon detection or even residue detection... I know it might be slo= w, <BR>>but it would be very helpfull to be able to detect certain stru= cture, let's <BR>>say alpha carbons to start with... <BR>> <BR>>I also know that the polyhedral command does a bit of structure de= tection, <BR>>and I was wondering if we could split this out a bit... t= hat is, have a script <BR>>command to force detection of certain struct= ures, i.e. alpha carbons, being <BR>>a C connected to a N, a C=3DO... l= et's just assume we're dealing with proteins <BR>>here... that's up to = the user of the command (say: find alphacarbon)... <BR>> <BR>>And wh= en this is in place, we can start add nice graphics to the FAH page... <BR></P> <P>That would be nice :)</P> |