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#3 diffseq produces error codes and incorrect formatting

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5
2006-11-13
2006-08-21
Mike T
No

diffseq produces all of the output files but one is formatted inforrectly
and errors are also reported.

Upon completion of the diffseq run, the following error is reported:

Error application terminated
Error: unknown output feature format 'gff,gff' will write as gff instead

All 3 of the required output files are generated but one is being generated
in embl format when gff is selected from the submit menu.

I'm using emboss v 3.0.0 and embossgui v 2.0.1

Discussion

  • Ryan Golhar

    Ryan Golhar - 2006-11-11

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    user_id=917846

    Can you provide input files to test with?

     
  • Luke McCarthy

    Luke McCarthy - 2006-11-13

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    user_id=1161851

    This is a problem with qualifiers, which are incompletely
    dealt with in emboss-explorer. Looking into it.

     
  • Luke McCarthy

    Luke McCarthy - 2006-11-13
    • assigned_to: nobody --> mccarthy
     

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