Search Results for "bias"
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Showing 80 open source projects for "bias"
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smclarify
Fairness aware machine learning. Bias detection and mitigation
Fairness Aware Machine Learning. Bias detection and mitigation for datasets and models. A facet is column or feature that will be used to measure bias against. A facet can have value(s) that designates that sample as "sensitive". Bias detection and mitigation for datasets and models. The label is a column or feature which is the target for training a machine learning model. The label can have value(s) that designates that sample as having a "positive" outcome. A bias measure is a function... -
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GPT Researcher
LLM based autonomous agent that does online comprehensive research
Say Hello to GPT Researcher, your AI mate for rapid insights and comprehensive research. GPT Researcher is the leading autonomous agent that takes care of everything from accurate source gathering to organization of research results. -
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Bootstrap.jl
Statistical bootstrapping library for Julia
Bootstrapping is a widely applicable technique for statistical estimation. -
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AIF360
A comprehensive set of fairness metrics for datasets
This extensible open source toolkit can help you examine, report, and mitigate discrimination and bias in machine learning models throughout the AI application lifecycle. We invite you to use and improve it. The AI Fairness 360 toolkit is an extensible open-source library containing techniques developed by the research community to help detect and mitigate bias in machine learning models throughout the AI application lifecycle. AI Fairness 360 package is available in both Python and R. The AI... -
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Awesome production machine learning
Curated list of awesome open source libraries
This repository contains a curated list of awesome open source libraries that will help you deploy, monitor, version, scale, and secure your production machine learning. Open-source frameworks, tutorials, and articles curated by machine learning professionals. Open-source bias audit toolkits for data scientists, machine learning researchers, and policymakers to audit machine learning models for discrimination and bias, and to make informed and equitable decisions around developing and deploying... -
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ClimateTools.jl
Climate science package for Julia
Climate analysis tools in Julia. ClimateTools.jl is a collection of commonly-used tools in Climate science. Basics of climate field analysis are covered, with some forays into exploratory techniques associated with climate scenario design. The package is aimed to ease the typical steps of analysis of climate models outputs and gridded datasets (support for weather stations is a work-in-progress). Climate indices and bias correction functions are coded to leverage the use of multiple threads... -
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TorchIO
Medical imaging toolkit for deep learning
TorchIO is an open-source Python library for efficient loading, preprocessing, augmentation and patch-based sampling of 3D medical images in deep learning, following the design of PyTorch. It includes multiple intensity and spatial transforms for data augmentation and preprocessing. These transforms include typical computer vision operations such as random affine transformations and also domain-specific ones such as simulation of intensity artifacts due to MRI magnetic field inhomogeneity (bias... -
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Guardrails
Adding guardrails to large language models
Guardrails is a Python package that lets a user add structure, type and quality guarantees to the outputs of large language models (LLMs). At the heart of Guardrails is the rail spec. rail is intended to be a language-agnostic, human-readable format for specifying structure and type information, validators and corrective actions over LLM outputs. We create a RAIL spec to describe the expected structure and types of the LLM output, the quality criteria for the output to be considered valid,... -
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Giskard
Collaborative & Open-Source Quality Assurance for all AI models
... dozens of vulnerabilities. The Giskard scan automatically detects vulnerability issues such as performance bias, data leakage, unrobustness, spurious correlation, overconfidence, underconfidence, unethical issue, etc. Giskard automatically generates relevant tests based on the vulnerabilities detected by the scan. You can easily customize the tests depending on your use case by defining domain-specific data slicers and transformers as fixtures of your test suites. -
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kube-monkey
An implementation of Netflix's Chaos Monkey for Kubernetes clusters
kube-monkey is an implementation of Netflix's Chaos Monkey for Kubernetes clusters. It randomly deletes Kubernetes (k8s) pods in the cluster encouraging and validating the development of failure-resilient services. kube-monkey runs at a pre-configured hour (run_hour, defaults to 8 am) on weekdays, and builds a schedule of deployments that will face a random Pod death sometime during the same day. The time-range during the day when the random pod Death might occur is configurable and defaults... -
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LaMDA-pytorch
Open-source pre-training implementation of Google's LaMDA in PyTorch
Open-source pre-training implementation of Google's LaMDA research paper in PyTorch. The totally not sentient AI. This repository will cover the 2B parameter implementation of the pre-training architecture as that is likely what most can afford to train. You can review Google's latest blog post from 2022 which details LaMDA here. You can also view their previous blog post from 2021 on the model. -
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The C-Munipack is an astrophotometry software package, which offers a complete solution for reduction of images carried out by CCD or DSLR camera, intended on a observation of variable stars, exoplanets and minor Solar System bodies. It provides a simple and intuitive graphical user interface.
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Euler Pole Calculator (EPC)
A Matlab software to estimate Euler pole parameters
The EPC software calculates the expected velocities for any points located on the earth’s surface given the relevant Euler pole parameters and estimates the Euler pole parameters given the observed velocities of a set of sites located on the same tectonic plate.In version 2, the software is able to estimate or apply the origin rate bias (ORB) in the direct and inverse Euler pole problems. Keywords: Direct Euler pole problem, Inverse Euler pole problem, Origin rate bias. -
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p3d
General data-reduction tool for fiber-fed integral-field spectrographs
p3d is a general data-reduction tool for use with fiber-fed integral-field spectrographs (IFSs); although, the spectrum viewer works with spectrum data cubes of any origin. The tool is built about the proprietary software IDL (Harris/EXELIS; see http://www.harrisgeospatial.com), but can be used without any license. Most slowly running loops are implemented in parallelized C (OpenMP). -
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bootf2BCA
computing f2 bootstrap CI BCA
Computing similarity factor (f2) bootstrap bias corrected and accelerated confidence interval -
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Eventer
Rapid, unbiased, reproducible analysis of synaptic events
Eventer is a programme designed for the detection of spontaneous synaptic events measured by electrophysiology or imaging. The software combines deconvolution for detection, and variable length template matching approaches for screening out false positive events. Eventer also includes a machine learning-based approach allowing users to train a model to implement their ‘expert’ selection criteria across data sets without bias. Sharing models allows users to implement consistent analysis... -
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CodonU
A python project for analysis of codon usage for gene or genome analys
With CodonU, you can now easily read, manipulate, and analyze various file formats used in this kind of analysis, and generate high-quality graphics suitable for publishing. This open-source project incorporates various statistical measures necessary for codon usage analysis, including codon adaptation index, codon bias index, Gravy score, and correspondence analysis for both nucleotide and protein sequences. Start using CodonU today and see how it can revolutionize your genomics research... -
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ACORBA
Automated approach to measure root tip angles of Arabidopsis thaliana
Gravitropic response is studied in most of the laboratories working with Arabidopsis thaliana, for example, to detect new phenotypes in mutants. However, manual analysis of images and microscopy data are known to be subjected to human bias. This is particularly the case for manual measurements of root bending as the angle is set subjectively. In this context, it is essential to develop and use automated or semi-automated image analysis to produce faster, reproducible, and unbiased data... -
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CAMPARI
Software for molecular simulations and trajectory analysis
We are proud to introduce version 5 of CAMPARI. We have added a number of new features, most notably a Python interface for interpreting user-supplied code (with the help of ForPy), a novel trajectory storage standard (with the help of libpqxx/PostgreSQL), and a module for performing transition path theory. Naturally, CAMPARI continues to provide the reference implementation of the ABSINTH force field paradigm and implicit solvation model. CAMPARI is a joint package for performing and... -
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Blueprint XAS is a Matlab-based suite designed for the processing and analysis of near-edge x-ray absorption spectroscopy (XAS) data. The suite is designed primarily to assist users in exploring reasonable fit solutions while minimizing user bias.
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Learn Julia the Hard Way
Learn Julia the hard way
The Julia base package is pretty big, although at the same time, there are lots of other packages around to expand it with. The result is that on the whole, it is impossible to give a thorough overview of all that Julia can do in just a few brief exercises. Therefore, I had to adopt a little 'bias', or 'slant' if you please, in deciding what to focus on and what to ignore. Julia is a technical computing language, although it does have the capabilities of any general-purpose language and you'd... -
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Bias is a cross-platform versatile information management application / Organizer
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Quick & simple piano and all music instrument tuning program for linux and soundcard, can autodetect notes, can be adjusted by a ´bias´ - option for older lower-tuned pianos. Is o.k. for older computers & laptops (console program).
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DIFRATE
DIstortion Free Relaxation Analysis TEchnique (DIFRATE) software
... with singular value decomposition: Albert A. Smith, Matthias Ernst, Beat H. Meier, Fabien Ferrage. "Reducing bias in the analysis of solution-state NMR data with dynamics detectors." (2018) Currently available: http://doi.org/10.1002/anie.201901929 Contact: alsi-nmr@users.sourceforge.net Please contact me if you have any questions. Also check out INFOS for data extraction from NMR spectra (infos.sourceforge.net). -
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CUCAA tool
Codon Usage Co-Adaptation Analysis Tool "CUCAA Tool"
Tools are available to analysis the codon usage, but there are no tools available focusing on analyzing the codon usage co-adaptation between viruses and their hosts. Therefore, Codon Usage Co-Adaptation Analysis Tool "CUCAA Tool" were developed by python 3.7. The tool can calculate various codon usage bias measurements as effective number of codons, codon adaptation index, relative codon deoptimization index, similarity index, as well as a simple cluster machine learning approach to see...