Darren Natale

SN-agrin is just the canonical isoform. I added the reference and synonym. [Term] id: PR:A2ASQ1-1 name: agrin isoform m1 (mouse) def: "An agrin (mouse) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:A2ASQ1-1." [PRO:DNx, UniProtKB:A2ASQ1, PMID:11018052] comment: Category=organism-sequence. synonym: "mAGRN/iso:m1" EXACT PRO-short-label [PRO:DNx] synonym: "agrin isoform TM-agrin (mouse)" EXACT [UniProtKB:A2ASQ1] synonym: "SN-agrin...

F8VPM9

The first protein is identical to an existing PRO term, so I added the PMID to that term and made the TrEMBL-based accession an alt_id to the existing Swiss-Prot based PRO term. The second is an isoform of an existing PRO term, and defined accordingly. The third is a sequence variant of an existing isoform, and again defined accordingly. [Term] id: PR:Q03172 alt_id: PR:F8VPM9 name: zinc finger protein 40 (mouse) def: "A zinc finger protein 40 that is encoded in the genome of mouse." [PRO:DNx, OMA:Q03172,...

E9PYB0

J3QQ16

I have created the following two terms. The first one is considered organism-sequence because it is one of many isoforms (according to MGI), and not even the longest one, and it is quite unlikely that this entry will become the canonical. The second term is also one of many isoforms, but this one is the most likely to be the canonical for mouse based on alignment with the human orthology. I have therefore defined it as an organism-gene term. [Term] id: PR:J3QQ16 name: collagen, type VI, alpha 3 isoform...

two entries in pro/id

Closing old tickets already addressed. The issue you raised happened because the dynamic generator only looked for whatever comes before the first space, so found a valid accession when the space was present. It also 'split' the accession into two parts--one for the main accession and one for the isoform--based on a dash being present. So when the dash was there (with no space before it and no numbers after it) it again found a valid accession and ignored the lack of isoform number.