From the paper: "We also found that MIR165A and MIR166A are expressed in the abaxial...
Hi David, Thanks very much for the input. I think that you are right! I think I will...
NTR for cone matrix sheath
Added: +id: GO:0090658 +name: cone matrix sheath +namespace: cellular_component +def:...
Reviewing this thread, I agree with Peter. The definition can be interpreted as 'THROUGH'...
I suggest: interphotoreceptor matrix --[p] cone matrix sheath GO:new (as you proposed)...
Consulting with Moni (Munoz-Torres) on this but she's away for the next two weeks....
The latest plan. create new term CST complex in the place of the current GO:0070188...
NTR for cone matrix sheath
Needs an is_a parent. Suggestions welcome otherwise I will need to do some research....
NTR: locomotor gait pattern
David - may I request your input on this request, please? Locomotory behavior def:...
Done. Thanks for the suggestion.
tyrosine kinase binding parentage
fixed
inappropriate parent for sequestering of copper ion
tyrosine kinase binding parentage
NTR: locomotor gait pattern
inappropriate parent for sequestering of copper ion
query about threonylcarbamoyladenosine biosynthesis
I think this should do it: [Term] id: GO:0070525 -name: threonylcarbamoyladenosine...
possible new term:Telomeric loop dismantling or negative regulation of telomeric loop formation
Added: +id: GO:0090657 +name: telomeric loop disassembly +namespace: biological_process...
Edited version: name: telomeric loop disassembly syn: T loop disassembly def: The...
new term: double-stranded/single-stranded junction telomeric DNA binding
Changes: -is_a: GO:0043566 ! structure-specific DNA binding +is_a: GO:0000406 ! double-strand/single-strand...
Done.
glial cell derived neurotrophic factor
possible new term:Telomeric loop dismantling or negative regulation of telomeric loop formation
It makes sense to create a new term for the disassembly. Will look into this more...
new term: double-stranded/single-stranded junction telomeric DNA binding
I'll just add that new parent next week. Today is a holiday here in the US!
There are 8 terms. Will do.
glial cell derived neurotrophic factor
There are 12 terms. Will do.
new term/s request: anti-recombinase activity & child D loop dissociation
Added: +id: GO:0090656 +name: t-circle formation +namespace: biological_process +def:...
new term request: Formation of telomeric circles
new term: double-stranded/single-stranded junction telomeric DNA binding
[Term] +id: GO:0090655 +name: double-stranded/single-stranded junction telomeric...
After thinking about this some more, I decided to add this term as a direct child...
Assigning to you, David, for secondary review. Thanks.
replaced-by cardinality violations
Eyeballed. In my opinion, we should substitute 'consider' for all the 'replaced_by'...
From ChEBI: Dear Submitter, We are writing to inform you that your submission: submission:...
You're welcome!
Apical/Basolateral Cytoplasm and Recycling Endosome term request
Added: [Term] +id: GO:0090651 +name: apical cytoplasm +namespace: cellular_component...
Apical/Basolateral Cytoplasm and Recycling Endosome term request
also apical cytoplasm: part of apical part of cell is_a cytoplasmic part basolateral...
Revised definition: Interacting selectively and non-covalently with the junction...
-is_a: GO:0043234 ! protein complex +is_a: GO:0055029 ! nuclear DNA-directed RNA...
add parent for GO:0005658 alpha DNA polymerase:primase complex
Moved.
add parent for GO:0005658 alpha DNA polymerase:primase complex
GO:0030289 protein phosphatase 4 complex - expand def
-def: "The complex formed by the catalytic subunit of protein phosphatase 4 plus...
Added: +id: GO:0090649 +name: response to oxygen-glucose deprivation +namespace:...
response to oxygen-glucose deprivation
response to environmental enrichment
Added: +id: GO:0090648 +name: response to environmental enrichment +namespace: biological_process...
From the review: Telomeric circle. An extrachromosomal duplex or single-stranded...
new term request: Formation of telomeric circles
XBP1 unconventional splicing
You should also add 'HAC1-type intron splice site recognition and cleavage' as a...
add parent for GO:0005658 alpha DNA polymerase:primase complex
GO:0030289 protein phosphatase 4 complex - expand def
What's the CP? :) Complex Portal?
How about: Any process that results in a change in state or activity of an organism...
Is it always 'novel objects' ? You requested the synonym "response to the introduction...
Hi Stan, Would my modified definition work for you? Thanks, Tanya
Hi Stan, Following up on my question from a couple of weeks ago. Thanks, Tanya
Can you please also suggest a definition? Is the binding to either ds telomeric DNA...
ER proteasome terms
Terms have been made obsolete.
Annotation check: GO:0051488 (96 annotations, 20 EXP)activation of anaphase-promoting...
Annotation check: GO:0051488 (96 annotations, 20 EXP)activation of anaphase-promoting...
I've requested a new term 'tRNA threonylcarbamoyladenosine' to represent the threonylcarbamoyladenosine...
GO:0090645 APC-Cdc20 complex inhibitor activity
This will be fixed when https://sourceforge.net/p/geneontology/ontology-requests/11589/...
Close when ready. Thanks, Chris.
I'm going to send an obsoletion email for these: GO:0090302 APC-Cdc20 complex activity...
age-dependent behavioral decline
Done: id: GO:0035982 name: age-dependent behavioral decline namespace: biological_process...
I can add the 'tRNA modification' parent but the small molecule parentage will appear...
age-dependent behavioral decline
IMHO, membrane insertase activity fits into the def of transporter activity: "Enables...
This seems ok to me, Val. There may be other cases where it's less clear but this...
Sent today: Dear all, The proposal has been made to obsolete: ER proteasome complex...
Note that the term, 'GO:0000835 ER ubiquitin ligase complex' will lose the parentage...
I will send out an obsoletion alert tomorrow. Proposal is to obsolete ST-complex...
Assigning to you, Chris. Please check out the discussion so far. Thanks very muc...
Incorrect inter-ontology link ?
Hi Pascale, In this particular case, CLN3 does appear to be lysosomal. From the paper,...
request for review of definition for UV-A wavelength
Hi Mike, I've updated all the UV wavelengths, not just UV-A. Thanks for the feedback....
Hi Stan, The definition of your proposed terms ("...as a result of a change in the...
Hi Stan, Should it be '...absence of oxygen and glucose" or '...deprivation of oxygen...
Talking about obsoleting the following terms because of lack of proof of existence...
request for review of definition for UV-A wavelength