Hello, we were facing some issues with installing this tool. Here are the details: DEPENDENCIES: BreakDancerMax, Pindel, CnD, and SECluster BEDTools Samtoolsi Exonerate Set::IntSpan COMMANDS USED TO INSTALL: download from sourceforge.net/projects/svmerge/?source=typ_redirect COMMANDS USED TO RUN: ERROR (POTENTIAL REASON FOR NOT CONTINUING): Error1: too many dependencies. Exonerate requires glib. failed to install glib Please let us know if there is any solution. Thank you!
We faced some errors with running the tool. The details are as follows: INPUT: fasta reference SAM alignment COMMANDS: start tool: java -mx2000m -jar inGAP.jar Followed pdf to run tool (run only with GUI) Please let us know if there is any solution to this. Thank you!