Activity for Camille Laibe
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Camille Laibe committed [r762]
Updated nb models.
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Fixed typo.
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Fixed previously committed link.
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New link to online converters.
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Better handling of special characters in the mo...
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Updated maintainer email address.
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Launch of online simulations using the latest v...
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Disabled access to online simulation for models...
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Updated way to launch online simulations (mainl...
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Support for newer SVN versions, when building t...
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Usage of custom scripts for launching jobs on t...
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Added display of the package warning for publis...
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Fix omission in batch submission tool, when mod...
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Changes in libs for deployment in VMs with newe...
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Fixed special characters encoded in HTML.
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Reverted GoChartDatabase to r714, as the latest...
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Development version of the GO chart (including ...
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Improved display of disease related models page.
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Added display of the package warning for publis...
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Fixed some incorrect 'accept' attributes in forms.
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Fixed UTF-8 issue when deleting a model in cura.
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Added link to diseases related models in the menu.
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Typo fixed.
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Refinement of the description present on the ta...
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Added database related info in the debug page.
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Updated way to load info from SVN.
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Better logging when retrieving info from SVN.
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Fixed access to online simulation results.
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Updated BioModels citation in automatic submiss...
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Added logging when requesting the debug page (t...
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Switched from Log4j to SLF4J, in order to be ab...
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Preparation for the new way to access JWS model...
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Indeed works now. Thank you.
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SBML validator not responding
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Better logging during model submission.
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fda substance registration system (SRS)
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Uberon PURLs
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GlycoEpitope
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Duplicate of https://sourceforge.net/p/identifiers-org/new-collection/13/, so closing...
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Japan Consortium for Glycobiology and Glycotechnology DataBase
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Available at http://www.ebi.ac.uk/miriam/main/collections/MIR:00000478, so closing...
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LigandBox
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Available at http://www.ebi.ac.uk/miriam/main/collections/MIR:00000477, so closing...
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Available at http://www.ebi.ac.uk/miriam/main/collections/MIR:00000520 and not further...
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hgnc.family
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KEGG DISEASE
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This has been available for a while now: http://www.ebi.ac.uk/miriam/main/collections/MIR:00000475...
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KEGG MODULE
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This has been available for a while now: http://www.ebi.ac.uk/miriam/main/collections/MIR:00000474,...
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Added TODO.
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Allow MATLAB files as additional files.
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Switch to use BioJava (previously provided by J...
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Upgraded JSBML to 1.1 (r2164, latest trunk).
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Safer search with Lucene.
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More logging when performing database queries.
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Slightly safer way to load static pages.
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More robust model download facilities.
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Fixed various typos.
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Added PottersWheel as an option for additional ...
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Thank you for that. Actually that did not solve my issue. I realised that the 'compile'...
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Unable to compile some modules with Ant
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Parsing failing because of space in email address field
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Added link to AgedBrain models set in the menu.
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Minor cleaning.
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Properly closing the file reader when updating ...
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Added special case which was failing while all ...
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Added default value for publication date (lowes...
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Fixed model download link from the pipeline.
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Minor typo.
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- removed access auto-generated SBML levels and...
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Still missing fields retrieval...
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Update and extension of the unit tests for the ...
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Still missing fields retrieval...
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Updated warning for model using packages.
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Added missing database fields retrieval (caused...
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Fixed typo in SQL query preventing listing mode...
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Added maximum query length for the Path2Models ...
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Added missing database fields retrieval (caused...
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Added missing database fields retrieval (caused...
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Added the retrieval of new database fields.
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Added missing database fields retrieval when we...
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Adds detection of package(s) when replacing a m...
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Adds detection of package(s) when replacing a m...
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Avoid (but not prevent) the issue of curation c...
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Properly clean PreparedStatements between calls...
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Only adds creators in SBML file is they are not...
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Better logging of failed exports generation.
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Better logging of potential issues when generat...
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Various fixes related to the handling of the da...
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Fixed various issues related to files managemen...
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Fixed some SQL queries.
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Made sure that all ways to populate the model c...
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Use valid default value for timestamp.
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Made sure that package information is properly ...
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Fixed re-curation to not lose the date of first...
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Fixed detection of SBML package usage for displ...
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Improved the extraction of notes to avoid excep...
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Refactored the way to store publication info, i...
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Some BioPortal resources ends with a 404 in the health check
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Health check: issue with HTTPS and multiple hostnames
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