Thanks for fixing this! Is there anything else you want to change before the next review? Otherwise, please set the bug to needs-review.
The following article gives the deatils on the scaffold framework used and how ancestors are generated: The Scaffold Tree − Visualization of the Scaffold Universe by Hierarchical Scaffold Classification Schuffenhauer A, Ertl P, Roggo S, Wetzel S, Koch MA, Waldmann H. J Chem Inf Model. 2007 Jan-Feb;47(1):47-58. The command you used generates all possible (connected) ancestors with at least two rings following the approach of the paper, but skipping the prioritization rules. I would appreciate if you...
(1) Yes. (2) Line break is fine. The problem was that an empty line has been added at the end. This caused the depiction of the three dots although no content was hidden. Please use line break and avoid adding an unnecessary break at the end. (3) Ok. (4) This exception typically is thrown when sorting objects that do not implement Comparable in a consistent way. Please check this and open a bug report if necessary that blocks this feature. (5) Ok, I have not seen this exception again.
Exception during image-export
The code looks fine and I have not seen the excpetion for several exports.
Show subset comments in Table
Only some of the comments are displayed. I think the comments for all subsets that contain the molecule should be displayed. Which comments are shown in the current implementation? At the end of each entry of 'Subset Comments' the 3 dots indicating abbreviation are shown, even when increasing the size. Using a session saved with v2.6.3 a pop-up window informs me that the session could not be completely restored. This message is confusing, but this is not critical. The following Exception is thrown...
I am using Oracle Java 1.8.0_171 and KDE/Plasama. When using the quit button, System.exit is called. This ist not the case when closing the window and some threads (not the EDT) keep running...