Activity for nbcs

  • nbcs nbcs committed [fdfa38] on Code

    minor

  • nbcs nbcs committed [50bb4e] on Code

    updated yml for all os

  • nbcs nbcs committed [7849be] on Code

    Created yml dependencies file for sharing

  • nbcs nbcs committed [1bcf2d] on Code

    fileconflict solved

  • nbcs nbcs committed [ca655b] on Code

    quick polish

  • nbcs nbcs committed [72d54d] on Code

    Finished napari ROI

  • nbcs nbcs committed [59ac4a] on Code

    started adding napari module to crop/clear/save images

  • nbcs nbcs committed [fc908b] on Code

    fixed inversion in pi and biosensor images import in single frame analysis

  • nbcs nbcs committed [8d388d] on Code

    added console output for single frame analysis

  • nbcs nbcs committed [ea9f83] on Code

    stats are now exported with plot

  • nbcs nbcs committed [f2616d] on Code

    debugged the single frame boxplot plotting in compilation

  • nbcs nbcs committed [c58cf7] on Code

    implementation of rpy2

  • nbcs nbcs committed [45392e] on Code

    added rpy2 boxplot stats from R nparcomp

  • nbcs nbcs committed [5500c4] on Code

    finish the implementation of single frame compilation

  • nbcs nbcs committed [459b02] on Code

    continue

  • nbcs nbcs committed [403d1b] on Code

    implementation of single frame analysis up to condition compilation

  • nbcs nbcs committed [3264f2] on Code

    finish the implementation of the tracer change in graphics and compilations

  • nbcs nbcs committed [68a2fd] on Code

    tracer plot and values are now saved

  • nbcs nbcs committed [3740b4] on Code

    added tracer analyser

  • nbcs nbcs committed [b2be17] on Code

    Corrected the full path pattern research, now looking only in filenames

  • nbcs nbcs committed [8aeb6d] on Code

    lot

  • nbcs nbcs committed [cc577e] on Code

    Data compiled change so that every replicate as the same weight no matter how many cells

  • nbcs nbcs committed [a69b23] on Code

    fixed date format for FAST4Dreg folder names 01>1

  • nbcs nbcs committed [483001] on Code

    list of file to register are now ordered alphabetically to avoid conflicts

  • nbcs nbcs committed [e7c50b] on Code

    added a normalization in the final plotting and new plot window

  • nbcs nbcs committed [d7b1a2] on Code

    update todolist

  • nbcs nbcs committed [efbf6d] on Code

    code cleaning

  • nbcs nbcs committed [3199c9] on Code

    Added some user error popups and conditions

  • nbcs nbcs committed [9f9418] on Code

    ram conservative mode for FAST4Dreg set to true

  • nbcs nbcs committed [df9919] on Code

    now LRC runs Fast4Dreg with no bugs in a preprocessing tab

  • nbcs nbcs committed [812a82] on Code

    added a script to run FAST4Dreg from python with the associated macro

  • nbcs nbcs committed [1e214a] on Code

    GUI aesthetics

  • nbcs nbcs committed [5272ec] on Code

    plotting conditions is also exporting the compile csv + compile also export a excel friendly

  • nbcs nbcs committed [265b68] on Code

    Fixed the wrong variable now cell 1 to x

  • nbcs nbcs committed [d9e8fe] on Code

    find a segmentation compromise

  • nbcs nbcs committed [749aba] on Code

    added a second method of segmentation before finding a compromise

  • nbcs nbcs committed [281899] on Code

    add a index reset otherwise plot did not work

  • nbcs nbcs committed [cfb172] on Code

    fix save as for compiler and added folder name for analysis file

  • nbcs nbcs committed [e57dd6] on Code

    New GUI tab for plotting several conditions

  • nbcs nbcs committed [a05f46] on Code

    Integration of the compile into a GUI for LRC

  • nbcs nbcs committed [b9c373] on Code

    added graph and console in gui

  • nbcs nbcs committed [8dd44e] on Code

    added an column extractor compiler for 1 condition

  • nbcs nbcs committed [699d00] on Code

    Channelsplitter code

  • nbcs nbcs committed [38076c] on Code

    update with a version from chatgpt4

  • nbcs nbcs committed [3b5f4f] on Code

    Update with Oled screen display

  • nbcs nbcs committed [857c65] on Code

    initial commit

  • nbcs nbcs committed [1bf2f6]

    Fixed analysis plot display in scanner + wrong default broken factor back to 50

  • nbcs nbcs committed [bab940]

    fixed broken skeleton detector again

  • nbcs nbcs committed [6e42ad]

    fixed broken skeleton function in scanner

  • nbcs nbcs committed [b9ef65]

    Signed-off-by: nbcs

  • nbcs nbcs committed [4ceca6]

    Fixed the scanner-super accuracy export problem

  • nbcs nbcs committed [a47134]

    Fixed readability/comptability with ImageJ for non conform stacks

  • nbcs nbcs committed [faf183]

    solved excel export issue when a root is crashing

  • nbcs nbcs committed [2c9cf4]

    numerous updates

  • nbcs nbcs committed [f56d30]

    Reorganization of the scanner function in a package with modules

  • nbcs nbcs committed [d8ec4b]

    details

  • nbcs nbcs committed [38a87d]

    correcter writer.save() closing error and a bounding box negative pixel value in scanner.py

  • nbcs nbcs committed [c0f1bc]

    adding binding key to move frames

  • nbcs nbcs committed [691156]

    update napari loop module

  • nbcs nbcs committed [0f48a8]

    testing napari module looping, adding dependency licences

  • nbcs nbcs committed [cd798d]

    testing napari module for manual root segmentation in micro

  • nbcs nbcs committed [41059e]

    Few small unimportant correction

  • nbcs nbcs committed [b4c76d]

    Corrected a array decorated with ()

  • nbcs nbcs committed [a6e89d]

    add a tick box to correct or not the images

  • nbcs nbcs committed [6d4635]

    switch urrlib to requests library (pb with Certificates)

  • nbcs nbcs committed [610b51]

    update

  • nbcs nbcs committed [3e1d6d]

    Adding function and button for checking update

  • nbcs nbcs committed [bfe53e]

    update

  • nbcs nbcs committed [3bdbe8]

    Signed-off-by: nbcs <serrenelson@gmail.com>

  • nbcs nbcs committed [043584]

    Modified parser function to remove saveplot

  • nbcs nbcs committed [f8a9ba]

    code for v1.3

  • nbcs nbcs committed [dc2b80]

    corrected a too high batch size for super_accu

  • nbcs nbcs committed [89d304]

    Debug v1.2

  • nbcs nbcs committed [a92fff]

    Corrected paths to DML models. Corrected problem in method selection.

  • nbcs nbcs committed [219413]

    Initial commit

1