Activity for Matija Korpar
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Matija Korpar committed [3c1c37]
update readme
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added license
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fix
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fix
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makefile fix
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makefile fix
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makefile fix
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makefile fix
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makefile fix
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more macosx support
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mac osx support
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simd usage fix
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fix cpu building support
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simd usage update
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simd usage update
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speed updates
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simd init in gpu database solving
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verbose removal
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remove compile warnings
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makefile cuda code generating
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Revert "cpu-gpu simd progress"
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cpu/gpu sync, gpu simd usage updates
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cpu/gpu simd progress
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cpu/gpu sync bugfixes
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cpu/gpu sync bugfixes
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cpu/gpu simd solving init
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cpu/gpu sync progress
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cpu/gpu sync progress
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cpu-gpu simd progress
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multithreaded gpu init
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increase cpu chunk
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add thread number options
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optimize part by part solving
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cpu/gpu solving balance speedups
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simd ifdef
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update doxy file
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remove mpi module by default
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use new swimd
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fix cpu mpi building
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fix warning
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sort by name whe evalue and score are equal
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mpi update progress
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add missing include
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cpu/gpu parallel solve bugfix
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new cpu/gpu short solve fixes
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mem and speed fixes
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cpu test
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fix cpu/gpu balance
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fix no alignment output for bm0
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initialize array
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remove unused variable warnings
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remove unsafe "too early" check
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verbose updates
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faster aproximation of memory consumption
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move bucketing to utils
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use as much memory as you can
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ssw limitations fix
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lower cpu length
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better error verbose
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use as much memory as you can
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move bucketing to utils
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indexes bugfix
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added ssw, ssw integration
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verbose updates
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empty result bugfix
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ukkonnen bugfix
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remove unnecessarycard checking
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sw - no alignment found fix
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e-value updates
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library updates, output updates, verbose updates
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align best bugfix, distance outliers significal...
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doc updates
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swsharpdb documentation
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swsharp db not reading whole db at once anymore
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long names allowed
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verbose update
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bugfixes
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Merge branch 'master' of ssh://git.code.sf.net/...
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sse limits fix
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verbose updates
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