Activity for Lynn_Schriml
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Lynn_Schriml posted a comment on ticket #138
Hello Antonia, Sorry to hear you are having problems with the DO file. Which file are you trying to load ? doid.obo ? We define each of the relations we use. Would it be possible for you to remove the is_a definition ? Or could your loader skip any relations it already has defined ? I could also create a separate file for you, without the relation. Cheers, Lynn Sent from my iPhone On Oct 26, 2018, at 5:01 AM, Antonia Lock antonialock@users.sourceforge.net wrote: Hi sorry, I'm trying to edit the subject...
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June 20 2018 release
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latest HumanDO files May 2018 release
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latest HumanDO files May 2018 release
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DO November release
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Thank you Sara !! I will review. Cheers, Lynn On Nov 27, 2017, at 1:52 PM, Ticket 137 137@feature-requests.diseaseontology.p.re.sf.net wrote: [feature-requests:#137] https://sourceforge.net/p/diseaseontology/feature-requests/137/ New Term Request: Adenoid Cystic Carcinoma Status: open Group: Next Release (example) Created: Mon Nov 27, 2017 06:52 PM UTC by Anonymous Last Updated: Mon Nov 27, 2017 06:52 PM UTC Owner: nobody Hello, I was wondering if the term 'Adenoid Cystic Carcinoma' could be added,...
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Thank you for your interest in the Disease Ontology, I have moved your request to our GitHub tracker. Cheers, Lynn On Wed, Nov 15, 2017 at 9:25 AM, Julien Mariethoz mariethozj@users.sf.net wrote: [feature-requests:#135] https://sourceforge.net/p/diseaseontology/feature-requests/135/ New term request : Tn Polyagglutinability Syndrome* Status: open Group: Next Release (example) Created: Wed Nov 15, 2017 02:25 PM UTC by Julien Mariethoz Last Updated: Wed Nov 15, 2017 02:25 PM UTC Owner: nobody Tn Polyagglutinability...
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Thank you for the term request, this ticket has been transferred to our GitHub tracker. Cheers, Lynn On Wed, Nov 15, 2017 at 9:38 AM, Julien Mariethoz mariethozj@users.sf.net wrote: [feature-requests:#136] https://sourceforge.net/p/diseaseontology/feature-requests/136/ New term request : Erythroleukemia* Status: open Group: Next Release (example) Created: Wed Nov 15, 2017 02:38 PM UTC by Julien Mariethoz Last Updated: Wed Nov 15, 2017 02:38 PM UTC Owner: nobody Erythroleukemia redirects to https://en.wikipedia.org/wiki/...
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Thank you Julien !! I will take a look at your term request. I am copying your request to our GitHub tracker https://github.com/DiseaseOntology/HumanDiseaseOntology, we have retired our source forge tracker. Cheers, Lynn On Wed, Nov 15, 2017 at 9:24 AM, Julien Mariethoz mariethozj@users.sf.net wrote: [feature-requests:#134] https://sourceforge.net/p/diseaseontology/feature-requests/134/ New rerm request* Status: open Group: Next Release (example) Created: Wed Nov 15, 2017 02:24 PM UTC by Julien Mariethoz...
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Sept 2017 DO release
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Thank you Stan !! Sent from my iPhone On Sep 28, 2017, at 1:37 PM, Stan Laulederkind slaulederkind@users.sf.net wrote: [feature-requests:#133] transient neonatal thrombocytopenia Status: open Group: Next Release (example) Created: Thu Sep 28, 2017 05:37 PM UTC by Stan Laulederkind Last Updated: Thu Sep 28, 2017 05:37 PM UTC Owner: nobody The parent for "transient neonatal thrombocytopenia" (DOID:9771) should not be "transient neonatal neutropenia" (DOID:11245), but "thrombocytopenia" (DOID:1588)....
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Hello Veronique, Thank you for your interest in the Disease Ontology. I will take a look at these for addition to the DO. Please submit your request to out GitHub tracker. https://github.com/DiseaseOntology/HumanDiseaseOntology/issues https://github.com/DiseaseOntology/HumanDiseaseOntology/issues Apologies for any confusion, as we shut down our SF tracker a few years ago. Regards, Lynn On Aug 24, 2017, at 2:36 PM, veronique haddad mystigri69@users.sf.net wrote: [feature-requests:#132] https://sourceforge.net/p/diseaseontology/feature-requests/132/...
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DOs July release
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June 13 2017 DO release
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ICD10-code for DOID:0060224
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Color blindness is not a blindness
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Omenn Syndrome is duplicated
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New term request - Sarcomatoid carcinoma of the lung
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I have moved this ticket to our GitHub ticket system: https://github.com/DiseaseOntology/HumanDiseaseOntology/issues/319
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new term - Reifenstein syndrome
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I have moved this ticket to our GitHub ticket system. https://github.com/DiseaseOntology/HumanDiseaseOntology/issues/318
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NTR: OBIB/ NCI BBRB needs for histologic types of carcinomas
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test update
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Thank you !!!! Sent from my iPhone On Oct 14, 2016, at 1:17 PM, Elvira Mitraka emitraka@users.sf.net...
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Thank you for the clarification. I see your point. In the Disease Ontology, our classification...
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Hello Daniel, we will review your request for inclusion in DO. I have moved your...
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fixing parentages
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fixing multiple parentage terms
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fixing lung diseases
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added myopathy diseases for MGI
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adding nail congenital disorders for MGI
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Hello Sam, We updated DO's representation of spinocerebellar ataxias in our more...
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adding OMIM IDs for MGD
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Hello David, Thank you for the new term request. We will review and update DO early...
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adding OMIM IDs for MGI
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added autosomal dominant spinocellular ataxia d...
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added subytpes of spinocerebellar ataxia
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Review spinocerebellar ataxia type 5 dbxref/def of spinocerebellar ataxia
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All of the SCA diseases have been added to DO. Additionally, hereditary ataxia section...
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spinocerebellar ataxia subtype added
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NTR:polyglutamine disease
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Synonym requests: MJD etc
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adding license
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adding licence
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cleaned up spinocerebellar ataxia diseases, add...
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Hello Sabrina, Apologies for the delay in responding. We have been looking again...
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NTR: expansion of Parkinson disease for disease sub-entities
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moving Transmission Process Ontology to DO dire...
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moving Symptom Ontology to DO directory
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New term request: Pediatric High Grade Glioma
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NTR: myocardial necrosis
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fixed MGI identified OMIM grouping issues
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added spastic ataxia diseases
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adding terms for spastic ataxia
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Thank you Sridhar !! We will review this term for inclusion in DO. Cheers, Lynn On...
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Thank you for your term request to the Human Disease Ontology. We will review Vici...
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Thank you Sabrina !! On Tue, Aug 4, 2015 at 8:18 PM, Sabrina Toro sabrinatoro@users.sf.net...
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Thank you Gillian !! On Wed, Aug 5, 2015 at 4:49 AM, Gillian Millburn gm119@users.sf.net...
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Hello Sridhar, Thank you for your DO term request. We will review this term for inclusion...
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Thank you Gillian !! On Wed, Aug 5, 2015 at 4:33 AM, Gillian Millburn gm119@users.sf.net...
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Hello Sridhar, Thank you for sending us this new term to add to DO. We will review...
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adding DO style guide
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adding wrist and foot drop symptoms
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added in MGI terms and OMIM IDs
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removed a set of secondary parents
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updated DO - OMIM file
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adding definitions, fixing errors
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adding definitions to DO
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adding definitions to DO
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adding NCI thesaurus IDs and defintions to DO
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unobsoleted Kartagener syndrome
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adding definitions from NCIthesaurus to DO
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two IRIs associated with same label
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NTRs
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removed redundant synonyms
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added head and neck carcinoma
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added head and neck carcinoma
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added head and neck squamous cell carcinoma
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added head and neck cancer
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added head and neck cancer terms
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updated DO to finalize DO cancer slim terms
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Top Nodes of DO cancer slim
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updating DO cancer slim
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Request adding a synonym to CL term
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updating DO cancer slim
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updated DO cancer slim terms
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added in TCGA terms and removed redundant synonyms
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updating DO OMIM mapping file
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adding TCGA cancer terms and definitions
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fixed typo added root nodes to DO cancer slim
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added terms and definitions for DO cancer slim
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defining cancer terms
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adding definitions for PCBC disease terms
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removed benign terms from DO_cancer_slim
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adding cancer terms for DO Cancer Slim
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adding inflammatory myofibroblastic tumor to DO
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adding cancer terms and definitions
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adding cancer terms
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adding terms to Cancer DO Slim
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adding to DO Cancer slim
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