Activity for KM Van Auken
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KM Van Auken posted a comment on ticket #11
Thanks, Tony. I typically use the Lookup service when there are multiple accessions...
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Lookup service in Protein2GO and deleted accessions
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Co-ordinated solution sounds good. How would you like to proceed?
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Hi David, Yes, I can see where these terms are at the interface of anatomy and GO...
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chitin-based cuticle extracellular matrix
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Okay, sounds good. I'll add the BP terms via TermGenie and add references wherever...
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Amino acid transporter and transport terms
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Hi, Just wanted to add to this ticket, since I think I originally proposed it, although...
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QC check for gene products with ND and Experimental Annotation?
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Hi Rachael, Thanks for putting together the guidelines for miRNA curation. One question...
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An additional synonym: Narrow synonym: epidermal attachment structure Thanks, --...
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Update GO:0030056 hemidesmosome definition
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Perfect; thanks, Tony. --K.
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Search for ncRNAs by gene name
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Hi, I just reviewed the enzymology and the worm description and I think the description...
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NTR: tail spike morphogenesis
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Hi Tanya, Yes, I think that full structure looks correct. Thx.
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Hi, I didn't put this in my comment on Monday, but remembered that we had discussed...
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Hi, Here's a slightly revised proposal for these terms, based on some additional...
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Sure, any time tomorrow should be fine for a Skype call.
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Hi, Doing some more reading (PMID:21408209), I'm wondering if we haven't tried to...
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Hi, Wrt the renaming of GO:0045138, I think 'nematode tail tip morphogenesis' is...
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Hi Karen and Tanya, Yes, I think a parent-child relation between the 'tail tip morphogenesis'...
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Hi, Also note that two other proteins from C. briggsae and C. remanei are also associated...
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InterPro:IPR012613 - acid soluble spore protein includes C. elegans protein
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Hi, I wasn't sure if you were waiting for me. Here's a list of terms that could be...
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Hi Paolo, From the paper below, it seems that centrosomes have been lost in planarians...
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IPR004506 mapping to cytoplasm
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NTR: Meiotic cell cycle phase terms
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NTR: response to nematocide
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NTR: pri-miRNA transcription from RNA polymerase II promoter
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NTR: terminal web
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NTR: regulation of membrane permeability
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Thanks, Jane!
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Hi Jane, We've just had another paper come in that discusses localization to the...
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NTR: peptidyl-proline 4-dioxygenase binding
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