Unfortunately, this gave the same error. MOCAT MODULE MODE ACTIVATED MODULE = screen ERROR & EXIT: Tried to launch module 'screen', but could not find expected file /nas/longleaf/home/joshg/mocat2-master/dev/public/mod/screen/screen.sh at /nas/longleaf/home/joshg/mocat2-master/dev/public/src/MOCAT.pl line 1072. Using your suggestion, I edited the appropriate line of the runMOCAT.sh file to read: -sf my.samples -screen hg19 -screened_files Josh
Also, here are the tryMOCAT.sh file and the MOCAT.cfg file.
Issue with latest development version on SLURM cluster