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  • Posted a comment on ticket #6 on MarsBaR ROI toolbox for SPM

    My apologies! I thought they were the same thing. Thanks for catching this promptly. Best, Ilaria Ilaria Sani, PhD Postdoctoral Fellow, Freiwald Lab The Rockefeller University 1230 York Ave., New York, NY 10065. Phone: (212) 327 7699 Fax: (212) 327 7698 Email: isani01@rockefeller.eduhttps://rumail.rockefeller.edu/owa/redir.aspx?C=Kqhy3ohui0OLc6NBHS0gx_jC9yHmUtEIuvMTV8kpl1lEP6utIV_5LPRr35l0-k2eSQyLqrMn4XI.&URL=mailto%3assadagopan%40rockefeller.edu From: Matthew Brett matthewbrett@users.sourceforge.net...

  • Created ticket #6 on MarsBaR ROI toolbox for SPM

    unable to buid roi from image (batch)

  • Posted a comment on discussion Open Discussion on MarsBaR ROI toolbox for SPM

    I thought I had found a workaround by using fname = spm_vol(roi_list{i1}); % instead of fname = 'image.nii' roi = maroi_image(fname); roi = maroi_matrix(roi); the script now runs without errors and roi.mat is generated. However, when I attempt to visualize the rois from marsbar - roi definition - view They do not appear in the gui in the folder where they are. Thus I understand that marsbar does not recognize them. Does anyone have a clue? I noticed that the there is one difference between the roi...

  • Posted a comment on discussion Open Discussion on MarsBaR ROI toolbox for SPM

    Dear All, I am trying to batch script roi extraction from image (nii) to then perform ROI analysis over multiple ROIs and subjects. I am using the example lines provided: fname = roi_list{1}; roi = maroi_image(fname); I get an error early on while loading the roi. I have seen a couple of posts that resolved a similar issue by adding marsbar('on'). It didn't work for me. I tried to versions of matlab: 2016b and 2019a - same error I am using spm8 I am able to use the line params.vol = spm_vol(params)...

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