Kenny Tsang

Dear all, I have one illumina TruSeq long read assembly and three MiSeq 2x75 short reads assemblies. I want to merge the long read assembly to each of the short reads assemblies so that at the end I will have three total assmblies: 1) Long read scaffold + Velvet scaffolds 2) Long read scaffold + AbySS scaffolds 3) Long read scaffold + SOAP scaffolds However, I do not know how to denife the parameters in the config file, it looks like this: [global] mateAn_A=200 mateAn_B=300 bowtie2_read1=/lustre/projects/holfordlab/ktsang/TSSLR-BDA11_LongRead.fastq...