Eric Medina

Hi, thank you for your work building ARACNe-AP. I installed the software on my local machine using the command line and was able to run the program using the matrix.txt and tfs.txt files as an example and generated the network.txt file. I would like to ultimately use VIPER in R to predict protein activity but the input to VIPER is the .adj output file from ARACNe along with the expression matrix used to generate the .adj file. I am having trouble figuring out how to generate the .adj file. How would...