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  • Modified a wiki page on LMAT

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  • Posted a comment on discussion General Discussion on LMAT

    Hi Matt, sorry for the severe delay, I think there finally may be a resolution to the current compile issues. I just mentioned this in another post: https://sourceforge.net/p/lmat/discussion/general/thread/d1185a12/. Please try the cmake build version: https://github.com/LivGen/LMAT I'm hoping it will resolve this issue. Note this is version 1.2.4, which is the one I recommend using, thanks. --Jonathan

  • Posted a comment on discussion General Discussion on LMAT

    Hello Mathieue, sorry for not responding earlier, it took some time for me to recognize a likely solution here. We are moving the development over to github and using cmake for the build process. This version should compile on newer linux distributions. This is version 1.2.4 of LMAT and the one I'd recommend starting with. Please clone the repo here: https://github.com/LivGen/LMAT and feedback on whether this solves your problem (or doesn't) is welcome. I will try to update the sourceforge page soon...

  • Posted a comment on discussion General Discussion on LMAT

    Hi Mathieu, Running this in the runtime_inputs directory should downloaded the neded...

  • Posted a comment on discussion General Discussion on LMAT

    Each read is assigned a match score measuring how closely the read matches to the...

  • Posted a comment on discussion General Discussion on LMAT

    Hi Biren, The current specification should be: 04072014 for example: get_db.sh --dtype=inputs...

  • Posted a comment on discussion General Discussion on LMAT

    Hi Ara, thanks for the information. It maybe that the shell script syntax is slightly...

  • Modified a wiki page on LMAT

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Username:
bticktock
Joined:
2013-01-29 23:58:28

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This is a list of open source software projects that Jonathan is associated with:

  • Project Logo LMAT Efficient taxonomic labeling of very large metagenomic datasets. Last Updated:

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