Daniel Blezek

Hey Nick, Ahhhh! Face palm. Makes perfect sense, and serves me right for coding so late. I'll give it a shot right now. Appreciate the help! -dan

I'm trying to use the --initial-moving-transform flag with an MR and CT using version ANTs Version: 2.1.0.post789-g0740f. When I initialize the transform without doing any registration steps (FAQ, the resampled image looks very reasonable. However, when I run any steps in the registration, I get the dreaded Too many samples map outside moving image buffer. exception. Initial alignment: antsRegistration -d 3 \ --verbose 1 \ --initial-moving-transform [$FIXED,$MOVING,0] \ --transform Rigid[0.1] \ --use-histogram-matching...

I'm trying to use the --initial-moving-transform flag with an MR and CT version ANTs Version: 2.1.0.post789-g0740f. When I initialize the transform without doing any registration steps (FAQ, the resampled image looks very reasonable. However, when I run any steps in the registration, I get the dreaded Too many samples map outside moving image buffer. exception. Initial alignment: antsRegistration -d 3 \ --verbose 1 \ --initial-moving-transform [$FIXED,$MOVING,0] \ --transform Rigid[0.1] \ --use-histogram-matching...

I'm trying to use the --initial-moving-transform flag with an MR and CT. When I initialize the transform without doing any registration steps (FAQ, the resampled image looks very reasonable. However, when I run any steps in the registration, I get the dreaded Too many samples map outside moving image buffer. exception. Initial alignment: antsRegistration -d 3 \ --verbose 1 \ --initial-moving-transform [$FIXED,$MOVING,0] \ --transform Rigid[0.1] \ --use-histogram-matching 0 \ --metric MI["${FIXED}","${MOVING}",1,64,Regular,0.25]...