Update: running with -da option: taxtree.sh -da names.dmp nodes.dmp merged.dmp tree.taxtree.gz java -da -Xmx54807m -Xms54807m -cp /home/m322745/bin/bbmap/current/ tax.TaxTree -da names.dmp nodes.dmp merged.dmp tree.taxtree.gz Found 1 unknown taxonomic levels: Counted children. Percolated 9 rounds to fixpoint. Assigning strains. Percolated 2 rounds to fixpoint. Assigned levels to 173224 unranked nodes. Percolated 2 rounds to fixpoint. Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException:...
Problem running taxtree