Activity for Amar
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Amar modified a comment on a wiki page
Hi Dave/Team, We are trying to emulate the breast compression of a 10cm thick phantom for mammography/DBT using the below command "BreastPhantomDeformer.exe -xml_input PD50.vctx". The PD50.vctx file was generated using the BreastPhantomGenerator and moved to the folder 'openvct-svn-r79-trunk\BreastPhantomDeformer\trunk' before running above command. The compression does not seems to work as we intended. I am attaching a sample slices before and after compression along with the output xml file. Please...
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Hi Dave/Team, We are trying to emulate the breast compression of a 10cm thick phantom for mammography/DBT using the below command "BreastPhantomDeformer.exe -xml_input PD50.vctx". The PD50.vctx file was generated using the BreastPhantomGenerator and moved to the folder 'openvct-svn-r79-trunk\BreastPhantomDeformer\trunk' before running above command. The compression does not seems to work as we intended. I am attaching a sample slices before and after compression along with the output xml file.
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Hi Dave/Team, We are trying to emulate the breast compression of a 10cm thick phantom for mammography/DBT using the below command "BreastPhantomDeformer.exe -xml_input PD50.vctx". The PD50.vctx file was generated using the BreastPhantomGenerator and moved to the folder 'openvct-svn-r79-trunk\BreastPhantomDeformer\trunk' before running above command. The compression does not seems to work as we intended. I am attaching a sample slices before and after compression along with the output xml file.
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Hi Dave, That would be really helpful. Please also share us the instructions to build and any dependencies to install. As per my understanding, the deformer program is to emulate the compression of breast, is that correct? Thanks & Regards, Amar
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Hi Dave, We would like to run it on either Red Hat Enterprise Linux Server release 6.6 (without GPU support) or Red Hat Enterprise Linux Server release 7.9 (with GPU support). Thanks & Regards, Amar
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Hi Dave, Do you have Linux executables for the software similar to windows executable? specifically for BreastPhantomGenerator. or Do you have procedure to build it on a linux machine? Thanks & Regards, Amar
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Thank you Dave for the prompt response.
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Hi Dave, Is there any limit on the smallest voxel size that I can use to generate phantom? I just tried with 0.05 mm, but getting error "BreastPhantomGenerator::recursive_partition_simulation: OUTSIDE OF VOLUME!!". I also tried with voxel size of 0.01, but seems to fail to proceed to simulate phantom. Thanks & Regards, Amar
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Hi Dave, Thank you so much for your quick response and time. I tried to access sample xml files at link [VCT XML Files] in https://sourceforge.net/p/openvct/wiki/File%20Formats/ , but seems to be broken. So, I modified the vct_config.xml and used as input. Now I used your new template and able to generate new phantom. I am attaching a sample xml file that worked for me. I have couple of questions regarding the template. which one is correct for the volume parameter <volume>VOLUME</volume> or <volume>200ML</volume>?...
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Hi Dave, I am attaching the xml again here.
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Hi I am Amar, a PhD student at University of Houston. I am trying to use OPENVCT (BreastPhantomGenerator.exe) to generate new Breast Phantoms. When I run it on my windows10 based laptop, I was getting errors related to openCL. After trying with different windows versions and other computers, I was able to run on one specific PC with default configurations. Now I am trying to input a xml file to generate another Phantom. But I am getting error "couldn't read XML file", as attached. I am also attaching...
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Hi I am Amar, a PhD student at University of Houston. I am trying to use OPENVCT (BreastPhantomGenerator.exe) to generate new Breast Phantoms. When I run it on my windows10 based laptop, I was getting errors related to openCL. After trying with different windows versions and other computers, I was able to run on one specific PC with default configurations. Now I am trying to input a xml file to generate another Phantom. But I am getting error "couldn't read XML file", as attached. I am also attaching...
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