VSClinical

VSClinical

Golden Helix
Bioconductor VSClinical

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Bioconductor:

About

The Bioconductor project aims to develop and share open source software for precise and repeatable analysis of biological data. We foster an inclusive and collaborative community of developers and data scientists. Resources to maximize the potential of Bioconductor. From basic functionalities to advanced features, our tutorials, guides, and documentation have you covered. Bioconductor uses the R statistical programming language and is open source and open development. It has two releases each year and an active user community. Bioconductor provides Docker images for every release and provides support for Bioconductor use in AnVIL. Founded in 2001, Bioconductor is an open-source software project widely used in bioinformatics and biomedical research. It hosts over 2,000 R packages contributed by over 1,000 developers, with over 40 million downloads per year. Bioconductor has been cited in more than 60,000 scientific publications.
VSClinical:

About

VSClinical allows for the clinical interpretation of variants based on ACMG & AMP guidelines. The VSClinical guided workflow enables following the American College of Medical Genetics (ACMG) guidelines used to identify and classify causal variants for inherited disease risk, cancer predisposition, and the diagnosis of rare diseases. The ACMG/AMP joint guidelines for variant interpretation provide a set of criteria to score variants and place them into one of five classification tiers. Following the guidelines requires deep diving into the annotations, genomic context, and existing clinical assertions about every variant. VSClinical provides a tailored workflow to score each relevant criterion while also providing all the bioinformatic, literature and evidence from clinical knowledgebases to assist in the scoring and interpretation process. VSClinical is designed to allow variant scientists to efficiently process variants.
Bioconductor:

Platforms Supported

Windows Supported
Mac Supported
Linux Supported
Cloud Not Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
VSClinical:

Platforms Supported

Windows Not Supported
Mac Not Supported
Linux Not Supported
Cloud Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
Bioconductor:

Audience

Labs looking for a solution to improve their bioinformatics and biomedical research
VSClinical:

Audience

Geneticists wanting a tool to identify and classify causal variants for inherited disease risk
Bioconductor:

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Supported
VSClinical:

Support

Phone Support Supported
24/7 Live Support Not Supported
Online Supported
Bioconductor:

API

Offers API Not Supported
VSClinical:

API

Offers API Not Supported
Bioconductor:

Screenshots and Videos

VSClinical:

Screenshots and Videos

Bioconductor:

Pricing

Free
Free Version Supported
Free Trial Not Supported
VSClinical:

Pricing

No information available.
Free Version Not Supported
Free Trial Supported
Bioconductor:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software
VSClinical:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software
Bioconductor:

Training

Documentation Supported
Webinars Not Supported
Live Online Not Supported
In Person Not Supported
VSClinical:

Training

Documentation Supported
Webinars Supported
Live Online Supported
In Person Supported
Bioconductor:

Company Information

Bioconductor
Founded: 2001
United States
www.bioconductor.org
VSClinical:

Company Information

Golden Helix
Founded: 1998
United States
www.goldenhelix.com/products/VarSeq/vsclinical.html
Bioconductor:

Alternatives

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VSClinical:

Alternatives

Bioconductor:
VSClinical:
Alissa Interpret

Alissa Interpret

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Bioconductor:
VSClinical:
Bioconductor:
QIAGEN CLC Genomics Workbench

QIAGEN CLC Genomics Workbench

QIAGEN Digital Insights
VSClinical:
AlphaGenome

AlphaGenome

Google DeepMind
Bioconductor:
VSClinical:
StrandOmics

StrandOmics

Strand Life Sciences
Bioconductor:

Categories

VSClinical:

Categories

Bioconductor:

Integrations

Docker Supported
GenomeBrowse Not Supported
R Supported
VarSeq Not Supported
VSClinical:

Integrations

Docker Not Supported
GenomeBrowse Supported
R Not Supported
VarSeq Supported
Bioconductor:
Claim Bioconductor and update features and information
Claim Bioconductor and update features and information
VSClinical:
Claim VSClinical and update features and information
Claim VSClinical and update features and information