+
+

Related Products

  • Birdeye
    5,192 Ratings
    Visit Website
  • Canditech
    110 Ratings
    Visit Website
  • QuantaStor
    6 Ratings
    Visit Website
  • Fishbowl
    1,141 Ratings
    Visit Website
  • AuctionMethod
    43 Ratings
    Visit Website
  • CredentialingSpectrum
    5 Ratings
    Visit Website
  • Soraban
    8 Ratings
    Visit Website
  • ClickLearn
    67 Ratings
    Visit Website
  • DeskTime
    955 Ratings
    Visit Website
  • Nasdaq Boardvantage
    307 Ratings
    Visit Website

About

AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. Over the years, it has been modified and improved to add new functionalities, and multiple engines have been developed. Current distributions of AutoDock consist of two generations of software: AutoDock 4 and AutoDock Vina. More recently, we developed AutoDock-GPU, an accelerated version of AutoDock4 that is hundreds of times faster than the original single-CPU docking code. AutoDock 4 actually consists of two main programs: autodock performs the docking of the ligand to a set of grids describing the target protein; autogrid pre-calculates these grids. In addition to using them for docking, the atomic affinity grids can be visualized. This can help, for example, to guide organic synthetic chemists design better binders.

About

Nanome is a collaborative platform for molecular visualization and drug discovery. Teams load protein and small-molecule structures and review them together in 3D, in a web browser or in an XR headset (Meta Quest 3 and 3S, Apple Vision Pro, Samsung Galaxy XR). Everyone in a session sees the same structure at the same time, so a chemist in a headset and a colleague on a laptop can point at the same pocket from different cities. MARA, the AI copilot built into Nanome, runs docking, co-folding, electrostatics and ADMET estimates from plain-English requests, drawing on 300+ integrated scientific tools, and returns structures you can inspect in 3D. Nanome opens PDB, mmCIF, SDF, MOL2, PyMOL and Maestro files and connects to Schrodinger LiveDesign, OpenEye, Cresset Flare, CDD Vault, KNIME and Jupyter. Enterprise deployments run single-tenant or on-premises. Free web seat; 14-day full trial, no credit card.

Platforms Supported

Windows Supported
Mac Supported
Linux Supported
Cloud Not Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported

Platforms Supported

Windows Supported
Mac Not Supported
Linux Not Supported
Cloud Supported
On-Premises Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported

Audience

Automated docking tool that helps scientist predict how small molecules bind to a receptor of known 3D structure

Audience

Medicinal chemists, computational chemists, structural biologists, and educators in pharma, biotech, and academia

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Supported

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Supported

API

Offers API Not Supported

API

Offers API Not Supported

Screenshots and Videos

Screenshots and Videos

No images available

Pricing

No information available.
Free Version Not Supported
Free Trial Not Supported

Pricing

$20.83/month/user (academic)
Free Version Supported
Free Trial Supported

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software

Training

Documentation Supported
Webinars Not Supported
Live Online Not Supported
In Person Not Supported

Training

Documentation Supported
Webinars Supported
Live Online Supported
In Person Not Supported

Company Information

AutoDock
autodock.scripps.edu/

Company Information

Nanome
Founded: 2015
United States
nanome.ai

Alternatives

piDock

piDock

NaNXOR

Alternatives

No Alternatives
Trac Ahead

Trac Ahead

Exotrac
DockMaster

DockMaster

Valsoft
C3 Reservations

C3 Reservations

C3 Solutions

Categories

Drug Discovery Supported

Categories

Drug Discovery Supported
Molecular Modeling Supported

Integrations

YouMi Supported

Integrations

YouMi Not Supported
Claim AutoDock and update features and information
Claim AutoDock and update features and information
Claim Nanome and update features and information
Claim Nanome and update features and information