LigPlot+

LigPlot+

EMBL-EBI
AutoDock LigPlot+

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AutoDock:

About

AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. Over the years, it has been modified and improved to add new functionalities, and multiple engines have been developed. Current distributions of AutoDock consist of two generations of software: AutoDock 4 and AutoDock Vina. More recently, we developed AutoDock-GPU, an accelerated version of AutoDock4 that is hundreds of times faster than the original single-CPU docking code. AutoDock 4 actually consists of two main programs: autodock performs the docking of the ligand to a set of grids describing the target protein; autogrid pre-calculates these grids. In addition to using them for docking, the atomic affinity grids can be visualized. This can help, for example, to guide organic synthetic chemists design better binders.
LigPlot+:

About

LigPlot+ is a successor to our original LIGPLOT program for the automatic generation of 2D ligand-protein interaction diagrams. It is run from an intuitive java interface that allows on-screen editing of the plots via mouse click-and-drag operations. In addition to the new interface, the program includes several major enhancements over the old version. When two or more ligand-protein complexes are sufficiently similar, LigPlot+ can automatically display their interaction diagrams either superposed or side by side. Any conserved interactions are highlighted. The LigPlot+ suite also now includes an update of the original DIMPLOT program for plotting protein-protein or domain-domain interactions. Users can flexibly select the interface of interest and DIMPLOT will then generate a diagram showing the residue-residue interactions across the interface. To assist in interpretation, the residues in one of the interfaces can be optionally displayed in sequence order.
AutoDock:

Platforms Supported

Windows Supported
Mac Supported
Linux Supported
Cloud Not Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
LigPlot+:

Platforms Supported

Windows Supported
Mac Supported
Linux Supported
Cloud Not Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
AutoDock:

Audience

Automated docking tool that helps scientist predict how small molecules bind to a receptor of known 3D structure
LigPlot+:

Audience

Labs and researchers interested in a solution to create and visualize ligand-protein interaction diagrams
AutoDock:

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Supported
LigPlot+:

Support

Phone Support Supported
24/7 Live Support Not Supported
Online Supported
AutoDock:

API

Offers API Not Supported
LigPlot+:

API

Offers API Not Supported
AutoDock:

Screenshots and Videos

LigPlot+:

Screenshots and Videos

AutoDock:

Pricing

No information available.
Free Version Not Supported
Free Trial Not Supported
LigPlot+:

Pricing

No information available.
Free Version Not Supported
Free Trial Not Supported
AutoDock:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

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Review this Software
LigPlot+:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software
AutoDock:

Training

Documentation Supported
Webinars Not Supported
Live Online Not Supported
In Person Not Supported
LigPlot+:

Training

Documentation Supported
Webinars Supported
Live Online Not Supported
In Person Supported
AutoDock:

Company Information

AutoDock
autodock.scripps.edu/
LigPlot+:

Company Information

EMBL-EBI
United Kingdom
www.ebi.ac.uk/thornton-srv/software/LigPlus/
AutoDock:

Alternatives

piDock

piDock

NaNXOR
LigPlot+:

Alternatives

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SILCS

SilcsBio
AutoDock:
LigPlot+:
3decision

3decision

Discngine
AutoDock:
Trac Ahead

Trac Ahead

Exotrac
LigPlot+:
Aurora Drug Discovery

Aurora Drug Discovery

Aurora Fine Chemicals
AutoDock:
DockMaster

DockMaster

Valsoft
LigPlot+:
AutoDock:
C3 Reservations

C3 Reservations

C3 Solutions
1.0 out of 5 stars
LigPlot+:
AutoDock:

Categories

Drug Discovery Supported
LigPlot+:

Categories

Drug Discovery Supported
AutoDock:

Integrations

YouMi Supported
LigPlot+:

Integrations

YouMi Not Supported
AutoDock:
Claim AutoDock and update features and information
Claim AutoDock and update features and information
LigPlot+:
Claim LigPlot+ and update features and information
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